RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 BRAT1Q6PJG6 821 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 GDPD3Q7L5L3 318 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 GGHQ92820 318 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 DUS3LQ96G46 650 aaKnown RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 MRTO4Q9UKD2 239 aaKnown RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 NIPSNAP2O75323 286 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 PRKCGP05129 697 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 JUNP05412 331 aaKnown RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SNRNP70P08621 437 aaKnown RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 CSF1P09603 554 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 PRR5P85299 388 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 PAFAH1B3Q15102 231 aaKnown RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 TCTE1Q5JU00 501 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SDHAF4Q5VUM1 108 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 CD276Q5ZPR3 534 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 ENPP7Q6UWV6 458 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 GALNT13Q8IUC8 556 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 NETO1Q8TDF5 533 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 STK35Q8TDR2 534 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 AP1S3Q96PC3 154 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 HEBP1Q9NRV9 189 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 ZFR2Q9UPR6 939 aaKnown RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 MRC1P22897 1456 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 LOC285095A0A1B0GVY8 99 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 H3BRB1 525 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 MMP20O60882 483 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 CDKN2DP55273 166 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 BTG1P62324 171 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF616Q08AN1 781 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SLC10A7Q0GE19 358 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 GRIK2Q13002 908 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 KEAP1Q14145 624 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 CBX2Q14781 532 aaPredicted RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 C9orf57Q5W0N0 161 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 PLPPR4Q7Z2D5 763 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 B3GNT7Q8NFL0 401 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 ADAMTS15Q8TE58 950 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SLC35B4Q969S0 331 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 C14orf79Q96F83 325 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 CCDC86Q9H6F5 360 aaKnown RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 DCAF13Q9NV06 445 aaKnown RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 CFAP97Q9P2B7 532 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 A0A1B0GTW7 788 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 A0A1W2PRB8 838 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 FAM155AB1AL88 458 aaPredicted RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 EIF1AYO14602 144 aaKnown RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 EIF1AXP47813 144 aaKnown RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 DLX5P56178 289 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 CHAF1BQ13112 559 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SPIN4Q56A73 249 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 SLC16A9Q7RTY1 509 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 OR56B4Q8NH76 319 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 BRIX1Q8TDN6 353 aaKnown RBP5.83□□□□□ -1.48
VPS13B-203ENST00000358544 DPEP3Q9H4B8 488 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 EQTNQ9NQ60 294 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 HIF3AQ9Y2N7 669 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 PCDHB14Q9Y5E9 798 aa5.83□□□□□ -1.48
VPS13B-203ENST00000358544 NCOA6Q14686 2063 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ADAM10O14672 748 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 SCN2BO60939 215 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ADRB1P08588 477 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 TACSTD2P09758 323 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 CD53P19397 219 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ADH7P40394 386 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 METTL3Q86U44 580 aaKnown RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ACBD6Q9BR61 282 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 MYEF2Q9P2K5 600 aaKnown RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 IGKV6D-41A0A0C4DH26 115 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 SPNP16150 400 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 AANATQ16613 207 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 SOWAHAQ2M3V2 549 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 CHADLQ6NUI6 762 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 JAGN1Q8N5M9 183 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF283Q8N7M2 679 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 AUTS2Q8WXX7 1259 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ZBED3Q96IU2 234 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 SULT4A1Q9BR01 284 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF175Q9Y473 711 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 QSOX1O00391 747 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 CTNNB1P35222 781 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 GPR1P46091 355 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 RSU1Q15404 277 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 SMN1Q16637 294 aaKnown RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 CDNFQ49AH0 187 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 METAP1DQ6UB28 335 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 OR10H5Q8NGA6 315 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 OR14K1Q8NGZ2 314 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 OR4Q3Q8NH05 313 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 GNPDA2Q8TDQ7 276 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 NEK7Q8TDX7 302 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 GPER1Q99527 375 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 EPYCQ99645 322 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 COLEC11Q9BWP8 271 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ABCD2Q9UBJ2 740 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 SLC27A6Q9Y2P4 619 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 NAALAD2Q9Y3Q0 740 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 NME7Q9Y5B8 376 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 A0A0D9SG52 128 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 AMY2AP04746 511 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 PBX3P40426 434 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms