RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 MS4A3Q96HJ5 214 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 DIRAS2Q96HU8 199 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 VRK1Q99986 396 aaPredicted RBP8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 DNTTIP1Q9H147 329 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 MED28Q9H204 178 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 EMC7Q9NPA0 242 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 B3GAT2Q9NPZ5 323 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 LHX6Q9UPM6 363 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 OR2W5A6NFC9 320 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 FAM170BA6NMN3 283 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 STSP08842 583 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 LTA4HP09960 611 aaKnown RBP8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 MAPK1P28482 360 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 NOS2P35228 1153 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 ARL4AP40617 200 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 PLK1P53350 603 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 RPS7P62081 194 aaKnown RBP8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 SSX1Q16384 188 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 EIF2S3LQ2VIR3 472 aaKnown RBP8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 LRRC66Q68CR7 880 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 EIF3MQ7L2H7 374 aaKnown RBP8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 SHFQ7M4L6 423 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 BHLHA9Q7RTU4 235 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 SCD5Q86SK9 330 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 SLC34A3Q8N130 599 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 NANOGP1Q8N7R0 232 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 DMBX1Q8NFW5 382 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 RNF139Q8WU17 664 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 GGHQ92820 318 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 NXPE2Q96DL1 559 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 SLC38A2Q96QD8 506 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 COLEC11Q9BWP8 271 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 C14orf105Q9NVL8 296 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 GHRLQ9UBU3 117 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 PSORS1C1Q9UIG5 152 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 SAMHD1Q9Y3Z3 626 aaKnown RBP8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 HELZP42694 1942 aaKnown RBP8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 PRAMEF33A0A0G2JMD5 474 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 C2orf74A8MZ97 194 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 GALR2O43603 387 aaPredicted RBP8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 BRINP1O60477 761 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 PRAMEF10O60809 474 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 EGFP01133 1207 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 S100A9P06702 114 aaKnown RBP8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 EMX2Q04743 252 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 SNTB1Q13884 538 aaKnown RBP8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 LRRC32Q14392 662 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 TSTQ16762 297 aaKnown RBP8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 MICBQ29980 383 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 KLHL26Q53HC5 615 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 FAM76BQ5HYJ3 339 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 C10orf120Q5SQS8 335 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 PHYKPLQ8IUZ5 450 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 SLC22A9Q8IVM8 553 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 KRT78Q8N1N4 520 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 CFAP52Q8N1V2 620 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 NPWQ8N729 165 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 TMEM145Q8NBT3 493 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 NR4A3Q92570 626 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 FBXO32Q969P5 355 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 ZNF669Q96BR6 464 aaPredicted RBP8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 MTERF3Q96E29 417 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 TMEM169Q96HH4 297 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 SFXN2Q96NB2 322 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 COL21A1Q96P44 957 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 CYP2S1Q96SQ9 504 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 NELL2Q99435 816 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 NPY6RQ99463 290 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 QRSL1Q9H0R6 528 aaKnown RBP8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 MVB12BQ9H7P6 319 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 ACTR8Q9H981 624 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 SEBOXQ9HB31 216 aaPredicted RBP8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 SEC14L4Q9UDX3 406 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 OR12D3Q9UGF7 316 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 MAGEL2Q9UJ55 1249 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 PCDHB8Q9UN66 801 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 NCKAP1Q9Y2A7 1128 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 MUC3AQ02505 3323 aa8.87□□□□□ -0.99
SMARCAL1-202ENST00000358207 ZCWPW2A0A1B0GU75 182 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 A0A1W2PQL4 384 aaPredicted RBP8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 HLA-DQB1P01920 261 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 POLBP06746 335 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 ERCC2P18074 760 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 ATP12AP54707 1039 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 DIO3P55073 304 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 MTPNP58546 118 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 TPI1P60174 286 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 ELP6Q0PNE2 266 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 CHRNA6Q15825 494 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 HECTD3Q5T447 861 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 CEP97Q8IW35 865 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 LPCAT1Q8NF37 534 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 COQ8AQ8NI60 647 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 CREB3L4Q8TEY5 395 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 NARS2Q96I59 477 aaKnown RBP8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 PFDN5Q99471 154 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 NEU1Q99519 415 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 H2AFJQ9BTM1 129 aa8.86□□□□□ -0.99
SMARCAL1-202ENST00000358207 SDR39U1Q9NRG7 319 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms