RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 MRGPREQ86SM8 312 aa13.9□□□□□ -0.18
CCNE1-202ENST00000357943 LRRC25Q8N386 305 aaPredicted RBP13.9□□□□□ -0.18
CCNE1-202ENST00000357943 GLB1L3Q8NCI6 653 aaPredicted RBP13.9□□□□□ -0.18
CCNE1-202ENST00000357943 OR11G2Q8NGC1 345 aa13.9□□□□□ -0.18
CCNE1-202ENST00000357943 OR8J2Q8NGG1 315 aa13.9□□□□□ -0.18
CCNE1-202ENST00000357943 NACC2Q96BF6 587 aa13.9□□□□□ -0.18
CCNE1-202ENST00000357943 DGAT2Q96PD7 388 aa13.9□□□□□ -0.18
CCNE1-202ENST00000357943 BBS4Q96RK4 519 aa13.9□□□□□ -0.18
CCNE1-202ENST00000357943 ZBTB18Q99592 522 aa13.9□□□□□ -0.18
CCNE1-202ENST00000357943 BHLHE41Q9C0J9 482 aaPredicted RBP13.9□□□□□ -0.18
CCNE1-202ENST00000357943 GLIPR2Q9H4G4 154 aa13.9□□□□□ -0.18
CCNE1-202ENST00000357943 GIMAP4Q9NUV9 329 aa13.9□□□□□ -0.18
CCNE1-202ENST00000357943 ATAD3AQ9NVI7 634 aa13.9□□□□□ -0.18
CCNE1-202ENST00000357943 ARMCX1Q9P291 453 aa13.9□□□□□ -0.18
CCNE1-202ENST00000357943 IGHV1-45A0A0A0MS14 117 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 CDC14CA4D256 554 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 MASP2O00187 686 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 FCHO1O14526 889 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 PDPK1O15530 556 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 SEC24DO94855 1032 aaPredicted RBP13.9□□□□□ -0.19
CCNE1-202ENST00000357943 COX6A1P12074 109 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 CSNK2A2P19784 350 aaPredicted RBP13.9□□□□□ -0.19
CCNE1-202ENST00000357943 MPIP34949 423 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 FRKP42685 505 aaPredicted RBP13.9□□□□□ -0.19
CCNE1-202ENST00000357943 KIR3DL1P43629 444 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 NCBP2P52298 156 aaKnown RBP eCLIP13.9□□□□□ -0.19
CCNE1-202ENST00000357943 POLR2JP52435 117 aaKnown RBP13.9□□□□□ -0.19
CCNE1-202ENST00000357943 WNT3P56703 355 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 SRSF11Q05519 484 aaKnown RBP13.9□□□□□ -0.19
CCNE1-202ENST00000357943 BIKQ13323 160 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 PCOLCEQ15113 449 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 ELAVL1Q15717 326 aaKnown RBP13.9□□□□□ -0.19
CCNE1-202ENST00000357943 LTB4RQ15722 352 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 ZSCAN26Q16670 478 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 DPY19L1Q2PZI1 675 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 AGKQ53H12 422 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 RAB43Q86YS6 212 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 SAMD14Q8IZD0 417 aaPredicted RBP13.9□□□□□ -0.19
CCNE1-202ENST00000357943 ADCY4Q8NFM4 1077 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 OR9A2Q8NGT5 310 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 PTPMT1Q8WUK0 201 aaPredicted RBP13.9□□□□□ -0.19
CCNE1-202ENST00000357943 AMDHD1Q96NU7 426 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 ADAP2Q9NPF8 381 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 P4HTMQ9NXG6 502 aa13.9□□□□□ -0.19
CCNE1-202ENST00000357943 PCSK5Q92824 1860 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 MGAQ8IWI9 3026 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 A0A1W2PQ72 361 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 FAM234BA2RU67 622 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 ZNF891A8MT65 544 aaPredicted RBP13.89□□□□□ -0.19
CCNE1-202ENST00000357943 C17orf105B2RV13 164 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 PCDH17O14917 1159 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 CCDC22O60826 627 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 SCN2BO60939 215 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 ATP1B1P05026 303 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 PGRP06401 933 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 CT62P0C5K7 136 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 DDX5P17844 614 aaKnown RBP13.89□□□□□ -0.19
CCNE1-202ENST00000357943 TNNI3P19429 210 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 NT5EP21589 574 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 NTSP30990 170 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 S100A3P33764 101 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 SOX18P35713 384 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 ATP1A4Q13733 1029 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 RCAN2Q14206 197 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 PAPD4Q6PIY7 484 aaKnown RBP13.89□□□□□ -0.19
CCNE1-202ENST00000357943 BLOC1S3Q6QNY0 202 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 LRRC69Q6ZNQ3 347 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 GK5Q6ZS86 529 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 ZNF551Q7Z340 670 aaPredicted RBP13.89□□□□□ -0.19
CCNE1-202ENST00000357943 ANKRD46Q86W74 232 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 CCDC197Q8NCU1 140 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 RIT1Q92963 219 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 VPS33AQ96AX1 596 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 ZBED6CLQ96FA7 236 aaPredicted RBP13.89□□□□□ -0.19
CCNE1-202ENST00000357943 ZNF700Q9H0M5 742 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 CLCA3PQ9Y6N3 262 aa13.89□□□□□ -0.19
CCNE1-202ENST00000357943 A0A087WV48 116 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 A0A1W2PRB8 838 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 SYNDIG1LA6NDD5 238 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 HRKO00198 91 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 IL6P05231 212 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 PGDP52209 483 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 MANFP55145 182 aaKnown RBP13.88□□□□□ -0.19
CCNE1-202ENST00000357943 MRPS35P82673 323 aaKnown RBP13.88□□□□□ -0.19
CCNE1-202ENST00000357943 HSPB3Q12988 150 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 KLF10Q13118 480 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 PRICKLE4Q2TBC4 344 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 TIGD2Q4W5G0 525 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 CRTC2Q53ET0 693 aaPredicted RBP13.88□□□□□ -0.19
CCNE1-202ENST00000357943 CCDC81Q6ZN84 652 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 CLECL1Q8IZS7 167 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 ANKS4BQ8N8V4 417 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 C7orf57Q8NEG2 295 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 LPAR4Q99677 370 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 PELOQ9BRX2 385 aaKnown RBP13.88□□□□□ -0.19
CCNE1-202ENST00000357943 CCDC106Q9BWC9 280 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 MYLK2Q9H1R3 596 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 CXorf21Q9HAI6 301 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 ZNF160Q9HCG1 818 aa13.88□□□□□ -0.19
CCNE1-202ENST00000357943 SLC52A3Q9NQ40 469 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms