RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 CD22P20273 847 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 TGM1P22735 817 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 PSMB5P28074 263 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 HNRNPFP52597 415 aaKnown RBP6.5□□□□□ -1.37
RTN4-203ENST00000357376 PRR5P85299 388 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 SELENBP1Q13228 472 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 E2F2Q14209 437 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 GBX1Q14549 363 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 GPR68Q15743 365 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 SYPL1Q16563 259 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 NUDT18Q6ZVK8 323 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 ARMCX6Q7L4S7 300 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 GRASPQ7Z6J2 395 aaPredicted RBP6.5□□□□□ -1.37
RTN4-203ENST00000357376 RBM45Q8IUH3 476 aaKnown RBP6.5□□□□□ -1.37
RTN4-203ENST00000357376 TCEAL8Q8IYN2 117 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 NEIL3Q8TAT5 605 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.5□□□□□ -1.373e-47■□□□□ 9.6
RTN4-203ENST00000357376 JPH3Q8WXH2 748 aaPredicted RBP6.5□□□□□ -1.37
RTN4-203ENST00000357376 OR5P2Q8WZ92 322 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 RFKQ969G6 155 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 ZNF689Q96CS4 500 aaPredicted RBP6.5□□□□□ -1.37
RTN4-203ENST00000357376 CCDC32Q9BV29 185 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 ADAP2Q9NPF8 381 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 FBXO10Q9UK96 956 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 LCTP09848 1927 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 TRBV5-4A0A0C4DH59 114 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 CHST10O43529 356 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 OR5F1O95221 314 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 MAGEA2P43356 314 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 PRKCDQ05655 676 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 PCDH1Q08174 1060 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 SLC27A4Q6P1M0 643 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 PAQR6Q6TCH4 344 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 SLCO4C1Q6ZQN7 724 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 GDPD3Q7L5L3 318 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 FAM124AQ86V42 546 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 DCUN1D3Q8IWE4 304 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 ATP6V1C2Q8NEY4 427 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 TRMT2BQ96GJ1 504 aaKnown RBP6.5□□□□□ -1.37
RTN4-203ENST00000357376 ZNF514Q96K75 400 aaPredicted RBP6.5□□□□□ -1.37
RTN4-203ENST00000357376 CDADC1Q9BWV3 514 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 OR2B2Q9GZK3 357 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 GABARAPL1Q9H0R8 117 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 MED28Q9H204 178 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 CLEC4MQ9H2X3 399 aaPredicted RBP6.5□□□□□ -1.37
RTN4-203ENST00000357376 BEX1Q9HBH7 125 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 CCDC59Q9P031 241 aaKnown RBP6.5□□□□□ -1.37
RTN4-203ENST00000357376 OSGIN1Q9UJX0 560 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 SATB2Q9UPW6 733 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 NINQ8N4C6 2090 aa6.5□□□□□ -1.37
RTN4-203ENST00000357376 ZNF638Q14966 1978 aaKnown RBP6.5□□□□□ -1.37
RTN4-203ENST00000357376 A0A1B0GVC2 190 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 IRGMA1A4Y4 181 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 MEIOCA2RUB1 952 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 A6NIN4 97 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 M0R082 166 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 AKAP8O43823 692 aaKnown RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 ZNF821O75541 412 aaPredicted RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 C1orf105O95561 183 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 CLEC2LP0C7M8 214 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 LAMP2P13473 410 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 TIMP2P16035 220 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 ZNF8P17098 575 aaPredicted RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 CST5P28325 142 aaPredicted RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 GPR4P46093 362 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 CCR4P51679 360 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 SLC3A1Q07837 685 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 STX4Q12846 297 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 DEFB115Q30KQ5 88 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 ATAD3CQ5T2N8 411 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 PSRC1Q6PGN9 363 aaPredicted RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 TMEM107Q6UX40 140 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 LIPIQ6XZB0 460 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 WDR53Q7Z5U6 358 aaPredicted RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 KLHL36Q8N4N3 616 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 SLC38A5Q8WUX1 472 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 SMG7Q92540 1137 aaKnown RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 EFHD2Q96C19 240 aaPredicted RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 COQ8BQ96D53 544 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 CAPNS2Q96L46 248 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 QRSL1Q9H0R6 528 aaKnown RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 CXorf36Q9H7Y0 433 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 TAS2R7Q9NYW3 318 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 KLHL42Q9P2K6 505 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 TNFRSF10DQ9UBN6 386 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 RPS6KB2Q9UBS0 482 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 UGT2A1Q9Y4X1 527 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 IRAK3Q9Y616 596 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 SPACA6W5XKT8 324 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 PSME4Q14997 1843 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 TRAV6A0A075B6T7 132 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 DAPL1A0PJW8 107 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 PLD2O14939 933 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 DHFRP00374 187 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 MRPL3P09001 348 aaKnown RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 FURINP09958 794 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 ARAFP10398 606 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 ADH5P11766 374 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 IL7P13232 177 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms