RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 PORP16435 677 aaPredicted RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 HK3P52790 923 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 RPA4Q13156 261 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 TDGQ13569 410 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 BCL2A1Q16548 175 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 MEP1AQ16819 746 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 CATSPEREQ5SY80 951 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 AADACL4Q5VUY2 407 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 RAET1LQ5VY80 246 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 OR4C11Q6IEV9 310 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 TMEM205Q6UW68 189 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 HACD2Q6Y1H2 254 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 MAMDC2Q7Z304 686 aaPredicted RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 OSTM1Q86WC4 334 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 IL22RA1Q8N6P7 574 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 NAXEQ8NCW5 288 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 GALNT11Q8NCW6 608 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 OR52P1PQ8NH57 321 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 RELTQ969Z4 430 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 SMOQ99835 787 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 VRK1Q99986 396 aaPredicted RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 PELI2Q9HAT8 420 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 KLHL13Q9P2N7 655 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 SLC17A6Q9P2U8 582 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 ABCC6O95255 1503 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 GGT3PA6NGU5 568 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 TMEM233B4DJY2 109 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 C11orf98E9PRG8 122 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 PIRO00625 290 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 IFNA4P05014 189 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 TUBG1P23258 451 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 COL28A1Q2UY09 1125 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 CYP27C1Q4G0S4 372 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 SHFQ7M4L6 423 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 OR9A4Q8NGU2 314 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 MYRFLQ96LU7 910 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 PLEKHA3Q9HB20 300 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 SPATA6Q9NWH7 488 aaPredicted RBP6.19□□□□□ -1.42
UPF2-201ENST00000356352 ZNF226Q9NYT6 803 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 A6NLC8 198 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 H7BY64 318 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 SCO2O43819 266 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 CNTN5O94779 1100 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 CD1DP15813 335 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 HNF1BP35680 557 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 GDF5P43026 501 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 RABIFP47224 123 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 ACTBP60709 375 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 ACTG1P63261 375 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 MLLT1Q03111 559 aaPredicted RBP6.19□□□□□ -1.42
UPF2-201ENST00000356352 SLAMF1Q13291 335 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 RAB11BQ15907 218 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 CDNFQ49AH0 187 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 SUSD1Q6UWL2 747 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 ABHD12BQ7Z5M8 362 aaPredicted RBP6.19□□□□□ -1.42
UPF2-201ENST00000356352 MS4A15Q8N5U1 240 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 OR2T4Q8NH00 348 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 PRAP1Q96NZ9 151 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 STUB1Q9UNE7 303 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 PCDHGA6Q9Y5G7 932 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 LDB2O43679 373 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 OR2B3O76000 313 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 IFNA10P01566 189 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 STATHP02808 62 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 H2AFB2P0C5Z0 115 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 NDUFV2P19404 249 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 C5AR1P21730 350 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 GPX6P59796 221 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 GRM7Q14831 915 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 ZNF169Q14929 603 aaPredicted RBP6.19□□□□□ -1.42
UPF2-201ENST00000356352 RSU1Q15404 277 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 BTBD16Q32M84 506 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 LRIT3Q3SXY7 679 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 COQ5Q5HYK3 327 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 EMC10Q5UCC4 262 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 NXPE4Q6UWF7 544 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 GSG1LQ6UXU4 331 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 SLC16A9Q7RTY1 509 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 TMPRSS9Q7Z410 1059 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 CEACAM19Q7Z692 300 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 PXKQ7Z7A4 578 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 PPP1R35Q8TAP8 253 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 GCDHQ92947 438 aaPredicted RBP6.19□□□□□ -1.42
UPF2-201ENST00000356352 SLC45A3Q96JT2 553 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 SLC6A7Q99884 636 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 SULT4A1Q9BR01 284 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 MRI1Q9BV20 369 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 ZNF442Q9H7R0 627 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 FZD3Q9NPG1 666 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 SARDHQ9UL12 918 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 UBE2J1Q9Y385 318 aaPredicted RBP6.19□□□□□ -1.42
UPF2-201ENST00000356352 CYB5BO43169 146 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 COCHO43405 550 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 PRAMEF2O60811 474 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 PABPC4LP0CB38 370 aaKnown RBP6.19□□□□□ -1.42
UPF2-201ENST00000356352 ADORA3P0DMS8 318 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 SLURP2P0DP57 97 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 AK4P27144 223 aaPredicted RBP6.19□□□□□ -1.42
UPF2-201ENST00000356352 NUDT1P36639 197 aa6.19□□□□□ -1.42
UPF2-201ENST00000356352 DLSTP36957 453 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms