RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 GNRHRP30968 328 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 RAB28P51157 221 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 FADDQ13158 208 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 KCNAB2Q13303 367 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 LPAL2Q16609 132 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 OR52E8Q6IFG1 317 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 FAM180BQ6P0A1 224 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 PGAM5Q96HS1 289 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 SECISBP2Q96T21 854 aaKnown RBP12.63□□□□□ -0.39
SCN8A-202ENST00000355133 ATG5Q9H1Y0 275 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 M0R036 132 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 IFNA7P01567 189 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 THEGLP0DJG4 465 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 HSD3B1P14060 373 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 PGCP20142 388 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 HSD3B2P26439 372 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 GPR143P51810 404 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 CHRFAM7AQ494W8 412 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 HSD17B12Q53GQ0 312 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 AIG1Q9NVV5 245 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 SUSD2Q9UGT4 822 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 MLXQ9UH92 298 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 SLC7A11Q9UPY5 501 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 LIPT1Q9Y234 373 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 LRRN3E7EW58 273 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 PTGESO14684 152 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 NARSO43776 548 aaKnown RBP12.63□□□□□ -0.39
SCN8A-202ENST00000355133 CSF2P04141 144 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 GPR4P46093 362 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 HK3P52790 923 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 SRYQ05066 204 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 C3orf33Q6P1S2 294 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 FIGLAQ6QHK4 219 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 ZNF852Q6ZMS4 543 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 CDHR3Q6ZTQ4 885 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 NLGN4YQ8NFZ3 816 aaPredicted RBP12.63□□□□□ -0.39
SCN8A-202ENST00000355133 LRRN3Q9H3W5 708 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 MTG2Q9H4K7 406 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 C8orf33Q9H7E9 229 aaPredicted RBP12.63□□□□□ -0.39
SCN8A-202ENST00000355133 NFS1Q9Y697 457 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 ANHXE9PGG2 379 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 ATF4P18848 351 aaPredicted RBP12.63□□□□□ -0.39
SCN8A-202ENST00000355133 GCGRP47871 477 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 GBX1Q14549 363 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 FCAMRQ8WWV6 532 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 TMEM121BQ9BXQ6 578 aaPredicted RBP12.63□□□□□ -0.39
SCN8A-202ENST00000355133 HAPLN2Q9GZV7 340 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 OR10A4Q9H209 315 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 EXTL2Q9UBQ6 330 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 A6NLC8 198 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 SCAMP2O15127 329 aaKnown RBP12.63□□□□□ -0.39
SCN8A-202ENST00000355133 XKR5Q6UX68 686 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 CEACAM19Q7Z692 300 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 LAS2Q8IYD9 372 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 SGTBQ96EQ0 304 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 SEC14L4Q9UDX3 406 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 MKLN1Q9UL63 735 aa12.63□□□□□ -0.39
SCN8A-202ENST00000355133 ZNF35P13682 527 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 ACVR1BP36896 505 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 MAGEA2P43356 314 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 CD97P48960 835 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 RPS15P62841 145 aaKnown RBP12.62□□□□□ -0.39
SCN8A-202ENST00000355133 NSDHLQ15738 373 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 UGT3A2Q3SY77 523 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 RELL1Q8IUW5 271 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 PROKR1Q8TCW9 393 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 GATAD2BQ8WXI9 593 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 LINC00597Q9H2U6 94 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 WDR6Q9NNW5 1121 aaKnown RBP12.62□□□□□ -0.39
SCN8A-202ENST00000355133 STOX2Q9P2F5 926 aaPredicted RBP12.62□□□□□ -0.39
SCN8A-202ENST00000355133 EEDO75530 441 aaKnown RBP12.62□□□□□ -0.39
SCN8A-202ENST00000355133 FOXK1P85037 733 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 TCEAL1Q15170 157 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 KLHDC8AQ8IYD2 350 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 NEIL3Q8TAT5 605 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 SUN5Q8TC36 379 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 ZNF431Q8TF32 576 aaPredicted RBP12.62□□□□□ -0.39
SCN8A-202ENST00000355133 DIO2Q92813 273 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 SLC6A7Q99884 636 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 A0A1W2PPW3 197 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 CCRL2O00421 344 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 PPM1BO75688 479 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 RAD51DO75771 328 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 LATS1O95835 1130 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 CA3P07451 260 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 GTF2F2P13984 249 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 KDELR2P33947 212 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 HNRNPKP61978 463 aaKnown RBP eCLIP12.62□□□□□ -0.39
SCN8A-202ENST00000355133 CLCA4Q14CN2 919 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 CDKL4Q5MAI5 379 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 TRIM73Q86UV7 250 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 CLECL1Q8IZS7 167 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 ELP5Q8TE02 316 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 ZNF226Q9NYT6 803 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 DKK3Q9UBP4 350 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 NUP50Q9UKX7 468 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 A0A0U1RQS6 177 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 H0YJX3 145 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 DRD2P14416 443 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 RBMS1P29558 406 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms