RNA–Protein interactions for RNA: ENST00000354412.7

LRP8-203, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-203ENST00000354412 COX10Q12887 443 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 QSOX2Q6ZRP7 698 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 TPRG1Q6ZUI0 275 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 HDDC2Q7Z4H3 204 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 TMEM145Q8NBT3 493 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 ZNF296Q8WUU4 475 aaPredicted RBP13.2□□□□□ -0.3
LRP8-203ENST00000354412 PIGUQ9H490 435 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 NARFLQ9H6Q4 476 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 RANBP3Q9H6Z4 567 aaPredicted RBP13.2□□□□□ -0.3
LRP8-203ENST00000354412 TMEM39AQ9NV64 488 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 TESQ9UGI8 421 aaKnown RBP13.2□□□□□ -0.3
LRP8-203ENST00000354412 OR51B4Q9Y5P0 310 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 SMAD6O43541 496 aaKnown RBP13.2□□□□□ -0.3
LRP8-203ENST00000354412 SGTAO43765 313 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 SH3BGRLO75368 114 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 SLC22A5O76082 557 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 H1F0P07305 194 aaKnown RBP13.2□□□□□ -0.3
LRP8-203ENST00000354412 IRF1P10914 325 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 DDX5P17844 614 aaKnown RBP13.2□□□□□ -0.3
LRP8-203ENST00000354412 ETV5P41161 510 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 GATMP50440 423 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 ETV1P50549 477 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 LIM2P55344 173 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 DSTNP60981 165 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 ALDH6A1Q02252 535 aaKnown RBP13.2□□□□□ -0.3
LRP8-203ENST00000354412 CDH18Q13634 790 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 PUM1Q14671 1186 aaKnown RBP eCLIP13.2□□□□□ -0.39e-7■□□□□ 11.3
LRP8-203ENST00000354412 DUSP6Q16828 381 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 TOR2AQ5JU69 321 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 CRTC1Q6UUV9 634 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 TSPAN33Q86UF1 283 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 GHDCQ8N2G8 530 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 PXYLP1Q8TE99 480 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 NECTIN4Q96NY8 510 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 GFM1Q96RP9 751 aaKnown RBP13.2□□□□□ -0.3
LRP8-203ENST00000354412 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.2□□□□□ -0.35e-6■■□□□ 11.6
LRP8-203ENST00000354412 EIF3KQ9UBQ5 218 aaKnown RBP13.2□□□□□ -0.3
LRP8-203ENST00000354412 EXO1Q9UQ84 846 aaKnown RBP13.2□□□□□ -0.3
LRP8-203ENST00000354412 CDH10Q9Y6N8 788 aa13.2□□□□□ -0.3
LRP8-203ENST00000354412 SCN5AQ14524 2016 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 ALPK3Q96L96 1907 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 A0A1W2PQ45 241 aaPredicted RBP13.19□□□□□ -0.3
LRP8-203ENST00000354412 A0A1W2PQY0 241 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 OR5K3A6NET4 321 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 H7C4K7 107 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 CACNB4O00305 520 aaPredicted RBP13.19□□□□□ -0.3
LRP8-203ENST00000354412 ZNF8P17098 575 aaPredicted RBP13.19□□□□□ -0.3
LRP8-203ENST00000354412 ELAVL4P26378 380 aaKnown RBP13.19□□□□□ -0.3
LRP8-203ENST00000354412 RAB40BQ12829 278 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 NAE1Q13564 534 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 LHX8Q68G74 356 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 TMIGD1Q6UXZ0 262 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 DNAJB7Q7Z6W7 309 aaPredicted RBP13.19□□□□□ -0.3
LRP8-203ENST00000354412 METTL3Q86U44 580 aaKnown RBP13.19□□□□□ -0.3
LRP8-203ENST00000354412 C9orf62Q8N4C0 152 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 LRRC17Q8N6Y2 441 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 LRRC20Q8TCA0 184 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 TM9SF4Q92544 642 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 MED8Q96G25 268 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 CFHR5Q9BXR6 569 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 BRD9Q9H8M2 597 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 STARD7Q9NQZ5 370 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 PTTG3PQ9NZH4 202 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 A0A1W2PRB8 838 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 NPIPB15A6NHN6 443 aaPredicted RBP13.19□□□□□ -0.3
LRP8-203ENST00000354412 FAM227AF5H4B4 570 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 BTN3A3O00478 584 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 VNN2O95498 520 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 IGSF6O95976 241 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 FURINP09958 794 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 TNNI3P19429 210 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 LHCGRP22888 699 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 CSKP41240 450 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 PER3P56645 1201 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 IKZF1Q13422 519 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 ADAM15Q13444 863 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 PDE7AQ13946 482 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 NDUFA9Q16795 377 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 SYT14P1Q58G82 188 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 ZNF57Q68EA5 555 aaPredicted RBP13.19□□□□□ -0.3
LRP8-203ENST00000354412 MED27Q6P2C8 311 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 AGTRAPQ6RW13 159 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 CEACAM20Q6UY09 585 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 USP45Q70EL2 814 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.19□□□□□ -0.33e-6■■□□□ 13.2
LRP8-203ENST00000354412 OTULINQ96BN8 352 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 SCRN2Q96FV2 425 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 LRR1Q96L50 414 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 NLNQ9BYT8 704 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 GPR62Q9BZJ7 368 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 ZSCAN32Q9NX65 697 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 ACSL6Q9UKU0 697 aa13.19□□□□□ -0.3
LRP8-203ENST00000354412 SF3B6Q9Y3B4 125 aaKnown RBP13.19□□□□□ -0.3
LRP8-203ENST00000354412 TRDV1A0A1B0GX56 115 aa13.18□□□□□ -0.3
LRP8-203ENST00000354412 ISM1B1AKI9 464 aa13.18□□□□□ -0.3
LRP8-203ENST00000354412 HPGDSO60760 199 aa13.18□□□□□ -0.3
LRP8-203ENST00000354412 SLC19A2O60779 497 aa13.18□□□□□ -0.3
LRP8-203ENST00000354412 TSC22D2O75157 780 aa13.18□□□□□ -0.3
LRP8-203ENST00000354412 GAAP10253 952 aa13.18□□□□□ -0.3
LRP8-203ENST00000354412 SOAT1P35610 550 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms