RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.03□□□□□ -0.325e-7■□□□□ 9
SMC6-201ENST00000351948 TSSK4Q6SA08 328 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 FAM131AQ6UXB0 335 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 OR2L5Q8NG80 312 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 NKIRAS2Q9NYR9 191 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 RPL36Q9Y3U8 105 aaKnown RBP13.03□□□□□ -0.32
SMC6-201ENST00000351948 A6NL46 340 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 B3GALT4O96024 378 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 SMSP52788 366 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 TRAM2Q15035 370 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 TRIM61Q5EBN2 209 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 Q6ZS52 159 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 C7orf57Q8NEG2 295 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 EPYCQ99645 322 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 HDAC8Q9BY41 377 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 RBM7Q9Y580 266 aaKnown RBP13.03□□□□□ -0.32
SMC6-201ENST00000351948 ENTPD2Q9Y5L3 495 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 KLHL18O94889 574 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 RCBTB2O95199 551 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 HMGN1P05114 100 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 MRPL3P09001 348 aaKnown RBP13.03□□□□□ -0.32
SMC6-201ENST00000351948 ALDH3A2P51648 485 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 HK3P52790 923 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 PRDX1Q06830 199 aaKnown RBP13.03□□□□□ -0.32
SMC6-201ENST00000351948 TMEM207Q6UWW9 146 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 MINDY1Q8N5J2 469 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 BBS10Q8TAM1 723 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 DIO2Q92813 273 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 PDFQ9HBH1 243 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 SNTG1Q9NSN8 517 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 OBP2AQ9NY56 170 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 SLAMF8Q9P0V8 285 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 CDC14CA4D256 554 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 GABRR3A8MPY1 467 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 RNF13O43567 381 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 RBMS1P29558 406 aaKnown RBP13.03□□□□□ -0.32
SMC6-201ENST00000351948 NR0B1P51843 470 aaKnown RBP13.03□□□□□ -0.32
SMC6-201ENST00000351948 MS4A2Q01362 244 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 TAP2Q03519 686 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 GPR18Q14330 331 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 ARL9Q6T311 187 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 TMEM151BQ8IW70 566 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 CREB3L4Q8TEY5 395 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 OR1E3Q8WZA6 343 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 NTMT1Q9BV86 223 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 SLC6A16Q9GZN6 736 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 RNF121Q9H920 327 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 PLCL2Q9UPR0 1127 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 FAM227AF5H4B4 570 aa13.02□□□□□ -0.32
SMC6-201ENST00000351948 KHDRBS3O75525 346 aaKnown RBP13.02□□□□□ -0.32
SMC6-201ENST00000351948 BMP1P13497 986 aa13.02□□□□□ -0.32
SMC6-201ENST00000351948 CCNOP22674 350 aa13.02□□□□□ -0.32
SMC6-201ENST00000351948 EXOSC7Q15024 291 aaKnown RBP13.02□□□□□ -0.32
SMC6-201ENST00000351948 BTBD16Q32M84 506 aa13.02□□□□□ -0.32
SMC6-201ENST00000351948 Q7L0L9 218 aa13.02□□□□□ -0.32
SMC6-201ENST00000351948 NLGN4YQ8NFZ3 816 aaPredicted RBP13.02□□□□□ -0.32
SMC6-201ENST00000351948 NETO1Q8TDF5 533 aa13.02□□□□□ -0.32
SMC6-201ENST00000351948 THEM6Q8WUY1 208 aa13.02□□□□□ -0.32
SMC6-201ENST00000351948 EDAQ92838 391 aa13.02□□□□□ -0.32
SMC6-201ENST00000351948 PKMYT1Q99640 499 aa13.02□□□□□ -0.32
SMC6-201ENST00000351948 ATXN7L1Q9ULK2 861 aaPredicted RBP13.02□□□□□ -0.32
SMC6-201ENST00000351948 SPATA2Q9UM82 520 aa13.02□□□□□ -0.32
SMC6-201ENST00000351948 GFRA2O00451 464 aa13.02□□□□□ -0.32
SMC6-201ENST00000351948 HTR1EP28566 365 aa13.02□□□□□ -0.32
SMC6-201ENST00000351948 KCNAB2Q13303 367 aa13.02□□□□□ -0.32
SMC6-201ENST00000351948 C5orf22Q49AR2 442 aa13.02□□□□□ -0.32
SMC6-201ENST00000351948 SBSNQ6UWP8 590 aa13.02□□□□□ -0.32
SMC6-201ENST00000351948 LARP4Q71RC2 724 aaKnown RBP eCLIP13.02□□□□□ -0.321e-6■□□□□ 8.9
SMC6-201ENST00000351948 CHST4Q8NCG5 386 aa13.02□□□□□ -0.32
SMC6-201ENST00000351948 MOAP1Q96BY2 351 aa13.02□□□□□ -0.32
SMC6-201ENST00000351948 DNMT3AQ9Y6K1 912 aaPredicted RBP13.02□□□□□ -0.32
SMC6-201ENST00000351948 A6NCN8 305 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 LOC110117498-PIK3R3F6TDL0 507 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 GSTM3P21266 225 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 CDH11P55287 796 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 PER3P56645 1201 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 HOXC5Q00444 222 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 PIGFQ07326 219 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 SLC36A3Q495N2 470 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 CRISPLD2Q9H0B8 497 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 TNFRSF10DQ9UBN6 386 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 XPNPEP2O43895 674 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 GPR4P46093 362 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 FNTBP49356 437 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 GINS1Q14691 196 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 TIGD6Q17RP2 521 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 MEX3DQ86XN8 651 aaKnown RBP13.02□□□□□ -0.33
SMC6-201ENST00000351948 ZNF676Q8N7Q3 588 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 ZUFSPQ96AP4 578 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 G6PC3Q9BUM1 346 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 PPP4R1LQ9P1A2 415 aa13.02□□□□□ -0.33
SMC6-201ENST00000351948 C17orf105B2RV13 164 aa13.01□□□□□ -0.33
SMC6-201ENST00000351948 H0YGG7 62 aa13.01□□□□□ -0.33
SMC6-201ENST00000351948 M0R3H8 397 aa13.01□□□□□ -0.33
SMC6-201ENST00000351948 SEC14L5O43304 696 aa13.01□□□□□ -0.33
SMC6-201ENST00000351948 ALDOCP09972 364 aaKnown RBP13.01□□□□□ -0.33
SMC6-201ENST00000351948 AFF3P51826 1226 aaKnown RBP13.01□□□□□ -0.33
SMC6-201ENST00000351948 ARF3P61204 181 aaPredicted RBP13.01□□□□□ -0.33
SMC6-201ENST00000351948 PPP2CBP62714 309 aa13.01□□□□□ -0.33
SMC6-201ENST00000351948 PPP2CAP67775 309 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms