RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ALPK3Q96L96 1907 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 PEX14O75381 377 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 ATXN1LP0C7T5 689 aaKnown RBP12.61□□□□□ -0.39
IFT88-202ENST00000351808 CTPS1P17812 591 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 OGNP20774 298 aaKnown RBP12.61□□□□□ -0.39
IFT88-202ENST00000351808 C4BPBP20851 252 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 GKP32189 559 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 GSTM5P46439 218 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 INSL4Q14641 139 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 PCBP2Q15366 365 aaKnown RBP eCLIP12.61□□□□□ -0.39
IFT88-202ENST00000351808 Q3ZCU0 254 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 MZT2AQ6P582 158 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 USP50Q70EL3 339 aaPredicted RBP12.61□□□□□ -0.39
IFT88-202ENST00000351808 ARRDC4Q8NCT1 418 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 SCARB1Q8WTV0 552 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 OTULINQ96BN8 352 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 FAM167AQ96KS9 214 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 COPS8Q99627 209 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 NSUN3Q9H649 340 aaKnown RBP12.61□□□□□ -0.39
IFT88-202ENST00000351808 RHCGQ9UBD6 479 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 PRKAB1Q9Y478 270 aa12.61□□□□□ -0.39
IFT88-202ENST00000351808 PRAMEF25A6NGN4 478 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 UPK3BL1B0FP48 263 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 UPK3BL2E5RIL1 263 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 ST8SIA5O15466 376 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 SDC3O75056 442 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 DRD2P14416 443 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 ACADLP28330 430 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 ACVR1Q04771 509 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 SP140Q13342 867 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 PLEKHH3Q7Z736 793 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 TAC4Q86UU9 113 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 SYNPOQ8N3V7 929 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 MRPL48Q96GC5 212 aaKnown RBP12.6□□□□□ -0.39
IFT88-202ENST00000351808 CDKN2AIPNLQ96HQ2 116 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 NIT2Q9NQR4 276 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 NKIRAS2Q9NYR9 191 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 RPH3AQ9Y2J0 694 aaPredicted RBP12.6□□□□□ -0.39
IFT88-202ENST00000351808 RPL36Q9Y3U8 105 aaKnown RBP12.6□□□□□ -0.39
IFT88-202ENST00000351808 TTLL8A6PVC2 850 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 MAGEB17A8MXT2 336 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 SOCS7O14512 581 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 ONECUT3O60422 494 aaPredicted RBP12.6□□□□□ -0.39
IFT88-202ENST00000351808 NBNO60934 754 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 GATBO75879 557 aaKnown RBP12.6□□□□□ -0.39
IFT88-202ENST00000351808 DRD5P21918 477 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 ITGB8P26012 769 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 CASP9P55211 416 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 MC2RQ01718 297 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 MFSD14CQ5VZR4 134 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 C9orf57Q5W0N0 161 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 IL20RBQ6UXL0 311 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 PDZD9Q8IXQ8 264 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 GPR135Q8IZ08 494 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 CLECL1Q8IZS7 167 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 TCEANCQ8N8B7 351 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 OR1M1Q8NGA1 313 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 KCTD13Q8WZ19 329 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 NELL1Q92832 810 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 PGAP3Q96FM1 320 aaPredicted RBP12.6□□□□□ -0.39
IFT88-202ENST00000351808 ZNF70Q9UC06 446 aaPredicted RBP12.6□□□□□ -0.39
IFT88-202ENST00000351808 MRTO4Q9UKD2 239 aaKnown RBP12.6□□□□□ -0.39
IFT88-202ENST00000351808 PCNTO95613 3336 aa12.6□□□□□ -0.39
IFT88-202ENST00000351808 OR6C75A6NL08 312 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 IQCF5A8MTL0 148 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 GATCO43716 136 aaKnown RBP12.59□□□□□ -0.39
IFT88-202ENST00000351808 GREM1O60565 184 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 GCM2O75603 506 aaPredicted RBP12.59□□□□□ -0.39
IFT88-202ENST00000351808 SOD1P00441 154 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 EGFP01133 1207 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 HSD17B2P37059 387 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 KIR3DL1P43629 444 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 SELENOWP63302 87 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 IRF5Q13568 498 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 VEZF1Q14119 521 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 SGCAQ16586 387 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 LY6KQ17RY6 165 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 CEACAM20Q6UY09 585 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 ZFP82Q8N141 532 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 ADAMTS14Q8WXS8 1223 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 FCRL1Q96LA6 429 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 RNF32Q9H0A6 362 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 CFAP97Q9P2B7 532 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 FNDC3AQ9Y2H6 1198 aaKnown RBP12.59□□□□□ -0.39
IFT88-202ENST00000351808 NPTNQ9Y639 398 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 C2orf92A0A1B0GVN3 265 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 PLSCR5A0PG75 271 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 TO15178 435 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 TFP02787 698 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 HLA-FP30511 346 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 AFF1P51825 1210 aaKnown RBP12.59□□□□□ -0.39
IFT88-202ENST00000351808 HLXQ14774 488 aaPredicted RBP12.59□□□□□ -0.39
IFT88-202ENST00000351808 DUOXA1Q1HG43 343 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 FBXO47Q5MNV8 452 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 FAM74A1Q5RGS3 127 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 AFTPHQ6ULP2 937 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 DBX2Q6ZNG2 339 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 TRIM46Q7Z4K8 759 aa12.59□□□□□ -0.39
IFT88-202ENST00000351808 EIF4E3Q8N5X7 224 aaKnown RBP12.59□□□□□ -0.39
IFT88-202ENST00000351808 OR52I1Q8NGK6 324 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms