RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 RGS19P49795 217 aa19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 GANABQ14697 944 aaKnown RBP19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 FBXO42Q6P3S6 717 aa19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 ABI3BPQ7Z7G0 1075 aa19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 ASPGQ86U10 573 aa19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 ENTHD1Q8IYW4 607 aa19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 CCDC116Q8IYX3 515 aa19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 FRMD1Q8N878 549 aa19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 KCT2Q8NC54 265 aa19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 OR13H1Q8NG92 308 aa19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 PHF10Q8WUB8 498 aaKnown RBP19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 XAGE5Q8WWM1 108 aa19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 FCRL4Q96PJ5 515 aa19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 NIPSNAP1Q9BPW8 284 aa19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 RSPO3Q9BXY4 272 aaPredicted RBP19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 CCDC90BQ9GZT6 254 aa19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 ZNF556Q9HAH1 456 aa19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 POLMQ9NP87 494 aaPredicted RBP19.23■□□□□ 0.67
CHRNA3-202ENST00000348639 ARRDC5A6NEK1 342 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 MBTPS2O43462 519 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 PCDHGA12O60330 932 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 WBP4O75554 376 aaKnown RBP19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 SERPINB7O75635 380 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 CCNB2O95067 398 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 CSNK2A2P19784 350 aaPredicted RBP19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 RABIFP47224 123 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 KCNJ5P48544 419 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 KHKP50053 298 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 ANXA11P50995 505 aaKnown RBP19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 LIM2P55344 173 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 CSNK2BP67870 215 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 BTN3A2P78410 334 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 ILF3Q12906 894 aaKnown RBP eCLIP19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 NPTX1Q15818 432 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 SYPL1Q16563 259 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 OR9Q2Q8NGE9 314 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 OR5D16Q8NGK9 328 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 ZFPM2Q8WW38 1151 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 UBE2FQ969M7 185 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 MOAP1Q96BY2 351 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 ZNF354BQ96LW1 612 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 MAPKAP1Q9BPZ7 522 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 RASSF1Q9NS23 344 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 ERVK-18Q9QC07 812 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 TRPC4Q9UBN4 977 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 PRAMEF26H0Y7S4 382 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 FFAR1O14842 300 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 MRPS14O60783 128 aaKnown RBP19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 NDUFS2O75306 463 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 NR2F1P10589 423 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 UGT2B7P16662 529 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 PPP2R1BP30154 601 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 EMX1Q04741 257 aaPredicted RBP19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 DUSP2Q05923 314 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 GPR18Q14330 331 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 CEBPEQ15744 281 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 GPR19Q15760 415 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 CCDC85BQ15834 202 aaPredicted RBP19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 SMN1Q16637 294 aaKnown RBP19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 ZNF750Q32MQ0 723 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 COLEC12Q5KU26 742 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 TM4SF19Q96DZ7 209 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 TOE1Q96GM8 510 aaKnown RBP19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 MSANTD3Q96H12 275 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 COL21A1Q96P44 957 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 ALPK1Q96QP1 1244 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 CCNB1IP1Q9NPC3 277 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 GIMAP4Q9NUV9 329 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 SEC14L3Q9UDX4 400 aa19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 GPC6Q9Y625 555 aaPredicted RBP19.22■□□□□ 0.67
CHRNA3-202ENST00000348639 IGLV3-19P01714 112 aa19.21■□□□□ 0.67
CHRNA3-202ENST00000348639 IGHV4-34P06331 123 aa19.21■□□□□ 0.67
CHRNA3-202ENST00000348639 SLC35G6P0C7Q6 338 aa19.21■□□□□ 0.67
CHRNA3-202ENST00000348639 MAGP20916 626 aa19.21■□□□□ 0.67
CHRNA3-202ENST00000348639 MPIP34949 423 aa19.21■□□□□ 0.67
CHRNA3-202ENST00000348639 KRT20P35900 424 aa19.21■□□□□ 0.67
CHRNA3-202ENST00000348639 TRIM73Q86UV7 250 aa19.21■□□□□ 0.67
CHRNA3-202ENST00000348639 TRIM48Q8IWZ4 208 aa19.21■□□□□ 0.67
CHRNA3-202ENST00000348639 ZNF540Q8NDQ6 660 aa19.21■□□□□ 0.67
CHRNA3-202ENST00000348639 OR56A1Q8NGH5 318 aa19.21■□□□□ 0.67
CHRNA3-202ENST00000348639 RAB2BQ8WUD1 216 aa19.21■□□□□ 0.67
CHRNA3-202ENST00000348639 APH1BQ8WW43 257 aa19.21■□□□□ 0.67
CHRNA3-202ENST00000348639 OR2A5Q96R48 311 aa19.21■□□□□ 0.67
CHRNA3-202ENST00000348639 SH3GL3Q99963 347 aa19.21■□□□□ 0.67
CHRNA3-202ENST00000348639 DCUN1D5Q9BTE7 237 aa19.21■□□□□ 0.67
CHRNA3-202ENST00000348639 RNF6Q9Y252 685 aa19.21■□□□□ 0.67
CHRNA3-202ENST00000348639 PCDHGA10Q9Y5H3 936 aa19.21■□□□□ 0.67
CHRNA3-202ENST00000348639 FAM20BO75063 409 aa19.2■□□□□ 0.66
CHRNA3-202ENST00000348639 TNFP01375 233 aa19.2■□□□□ 0.66
CHRNA3-202ENST00000348639 FHP07954 510 aa19.2■□□□□ 0.66
CHRNA3-202ENST00000348639 ZNF888P0CJ79 500 aaPredicted RBP19.2■□□□□ 0.66
CHRNA3-202ENST00000348639 C8orf89P0DMQ9 161 aa19.2■□□□□ 0.66
CHRNA3-202ENST00000348639 FUT4P22083 530 aa19.2■□□□□ 0.66
CHRNA3-202ENST00000348639 CBLP22681 906 aa19.2■□□□□ 0.66
CHRNA3-202ENST00000348639 FEN1P39748 380 aaKnown RBP19.2■□□□□ 0.66
CHRNA3-202ENST00000348639 CCR5P51681 352 aa19.2■□□□□ 0.66
CHRNA3-202ENST00000348639 PRKAG1P54619 331 aa19.2■□□□□ 0.66
CHRNA3-202ENST00000348639 ZNF542PQ5EBM4 170 aa19.2■□□□□ 0.66
CHRNA3-202ENST00000348639 DHRS4L2Q6PKH6 230 aa19.2■□□□□ 0.66
CHRNA3-202ENST00000348639 Q6ZPB1 254 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms