RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 EGLN3Q9H6Z9 239 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 SIAEQ9HAT2 523 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 CCDC177Q9NQR7 707 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-201ENST00000347613 IL20RAQ9UHF4 553 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 N6AMT1Q9Y5N5 214 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 ENPP4Q9Y6X5 453 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 LINC01553A4QN01 128 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 PRR23AA6NEV1 266 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 PLD2O14939 933 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 KIAA0355O15063 1070 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 CAPN5O15484 640 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-201ENST00000347613 MYO1DO94832 1006 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 ERGP11308 486 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 CD53P19397 219 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 FUT1P19526 365 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 FCARP24071 287 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 ITGB7P26010 798 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 CRISP1P54107 249 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 CAV3P56539 151 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 MLLT1Q03111 559 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-201ENST00000347613 FCHO2Q0JRZ9 810 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 LRRC74AQ0VAA2 488 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 TBCEQ15813 527 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-201ENST00000347613 TMEM31Q5JXX7 168 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 TPRG1LQ5T0D9 272 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 ANXA8L1Q5VT79 327 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 KHDRBS2Q5VWX1 349 aaKnown RBP5.72□□□□□ -1.49
CLCN3-201ENST00000347613 TANGO2Q6ICL3 276 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 ALKBH2Q6NS38 261 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 ERAP2Q6P179 960 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 PNCKQ6P2M8 343 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 PGBD2Q6P3X8 592 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 DEF8Q6ZN54 512 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 FBXO15Q8NCQ5 510 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-201ENST00000347613 NLGN4YQ8NFZ3 816 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-201ENST00000347613 OR8D4Q8NGM9 314 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 OR6T1Q8NGN1 323 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 ATL1Q8WXF7 558 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 DACH2Q96NX9 599 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 TREX2Q9BQ50 279 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-201ENST00000347613 YIPF2Q9BWQ6 316 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 RERGLQ9H628 205 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 KCNK6Q9Y257 313 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 CA5BQ9Y2D0 317 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 AP3M1Q9Y2T2 418 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 GPR52Q9Y2T5 361 aa5.72□□□□□ -1.49
CLCN3-201ENST00000347613 SPTBP11277 2137 aa5.71□□□□□ -1.49
CLCN3-201ENST00000347613 ARHGEF17Q96PE2 2063 aaPredicted RBP5.71□□□□□ -1.49
CLCN3-201ENST00000347613 CXorf51AA0A1B0GTR3 108 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 SHISA3A0PJX4 238 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 H3BQ06 376 aaPredicted RBP5.71□□□□□ -1.5
CLCN3-201ENST00000347613 MID1O15344 667 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 LZTS3O60299 673 aaPredicted RBP5.71□□□□□ -1.5
CLCN3-201ENST00000347613 LALBAP00709 142 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 DDCP20711 480 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 MMP11P24347 488 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 TRHRP34981 398 aaPredicted RBP5.71□□□□□ -1.5
CLCN3-201ENST00000347613 PPM1AP35813 382 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 ETV5P41161 510 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 BCL6P41182 706 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 FRKP42685 505 aaPredicted RBP5.71□□□□□ -1.5
CLCN3-201ENST00000347613 CRYBB2P43320 205 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 ETV1P50549 477 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 CLCNKAP51800 687 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 CSNK1G2P78368 415 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 EFNB1P98172 346 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 CDK3Q00526 305 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 FZD5Q13467 585 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 COL19A1Q14993 1142 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 AGERQ15109 404 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 BAK1Q16611 211 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 DGUOKQ16854 277 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF404Q494X3 552 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 TMEM240Q5SV17 173 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 DESI1Q6ICB0 168 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 ERN2Q76MJ5 926 aaKnown RBP5.71□□□□□ -1.5
CLCN3-201ENST00000347613 P3H2Q8IVL5 708 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 SLC7A5P1Q8MH63 180 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 DNAJC5GQ8N7S2 189 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 SYT14Q8NB59 555 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 OR2A1Q8NGT9 310 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 GIMAP1Q8WWP7 306 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 TM9SF4Q92544 642 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 TMEM203Q969S6 136 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 NEURL3Q96EH8 262 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 CNRIP1Q96F85 164 aaPredicted RBP5.71□□□□□ -1.5
CLCN3-201ENST00000347613 LINC00615Q96LM1 132 aaPredicted RBP5.71□□□□□ -1.5
CLCN3-201ENST00000347613 GAS2L1Q99501 681 aaPredicted RBP5.71□□□□□ -1.5
CLCN3-201ENST00000347613 SLC6A20Q9NP91 592 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 TBC1D24Q9ULP9 559 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 ICKQ9UPZ9 632 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 MRPS23Q9Y3D9 190 aaKnown RBP5.71□□□□□ -1.5
CLCN3-201ENST00000347613 HCN4Q9Y3Q4 1203 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 ATG4BQ9Y4P1 393 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 F5P12259 2224 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 A0A1W2PR48 441 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 UPK1BO75841 260 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 SERPIND1P05546 499 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 MSL3P1P0C860 447 aa5.71□□□□□ -1.5
CLCN3-201ENST00000347613 NR4A2P43354 598 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms