RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 EPS8L2Q9H6S3 715 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 ACTR8Q9H981 624 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 DNAJC15Q9Y5T4 150 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 PTPN13Q12923 2485 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 URADA6NGE7 173 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 H0YIV9 168 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 B3GALT2O43825 422 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 LDB3O75112 727 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 GBAP04062 536 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 HIST1H1TP22492 207 aaPredicted RBP15□□□□□ -0.01
RAB5C-201ENST00000346213 JAK1P23458 1154 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 BSGP35613 385 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 CPOXP36551 454 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 TSFMP43897 325 aaKnown RBP15□□□□□ -0.01
RAB5C-201ENST00000346213 LAPTM5Q13571 262 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 TUBA3CQ13748 450 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 EIF2S3LQ2VIR3 472 aaKnown RBP15□□□□□ -0.01
RAB5C-201ENST00000346213 PAGE2BQ5JRK9 111 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 TMEM198Q66K66 360 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 C18orf63Q68DL7 685 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 TUBA3EQ6PEY2 450 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 LARP4Q71RC2 724 aaKnown RBP eCLIP15□□□□□ -0.012e-6■■■■□ 20.3
RAB5C-201ENST00000346213 POU5F2Q8N7G0 328 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 GALNT11Q8NCW6 608 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 OR1N1Q8NGS0 311 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 FBXO27Q8NI29 283 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 RP9Q8TA86 221 aaKnown RBP15□□□□□ -0.01
RAB5C-201ENST00000346213 TWIST2Q8WVJ9 160 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 HAS2Q92819 552 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 MCUR1Q96AQ8 359 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 ZNF382Q96SR6 550 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 NPLQ9BXD5 320 aaPredicted RBP15□□□□□ -0.01
RAB5C-201ENST00000346213 C19orf25Q9UFG5 118 aaPredicted RBP15□□□□□ -0.01
RAB5C-201ENST00000346213 ATG4BQ9Y4P1 393 aa15□□□□□ -0.01
RAB5C-201ENST00000346213 ARHGAP10A1A4S6 786 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 FGF17O60258 216 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 ATP6V1G2O95670 118 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 UROSP10746 265 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 FOXA1P55317 472 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 ARG2P78540 354 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 LIPJQ5W064 366 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 ZNF324BQ6AW86 544 aaPredicted RBP14.99□□□□□ -0.01
RAB5C-201ENST00000346213 OR4N5Q8IXE1 308 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 MDS2Q8NDY4 140 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 OR4F6Q8NGB9 312 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 KCNC2Q96PR1 638 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 HBEGFQ99075 208 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 LPAR4Q99677 370 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 LIN28AQ9H9Z2 209 aaKnown RBP14.99□□□□□ -0.01
RAB5C-201ENST00000346213 CLK4Q9HAZ1 481 aaKnown RBP14.99□□□□□ -0.01
RAB5C-201ENST00000346213 PRTFDC1Q9NRG1 225 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 MAP10Q9P2G4 905 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 FBXW2Q9UKT8 454 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 TSC22D4Q9Y3Q8 395 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 COPG1Q9Y678 874 aaKnown RBP14.99□□□□□ -0.01
RAB5C-201ENST00000346213 NBPF19A0A087WUL8 3843 aa14.99□□□□□ -0.01
RAB5C-201ENST00000346213 A0A0A6YYD5 115 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 HRKO00198 91 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 UBDO15205 165 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 ZNF354AO60765 605 aaPredicted RBP14.98□□□□□ -0.01
RAB5C-201ENST00000346213 MYO1DO94832 1006 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 PGM1P36871 562 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 CD96P40200 585 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 ATP4BP51164 291 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 TDGF1P3P51864 188 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 RAP1GDS1P52306 607 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 MXRA7P84157 204 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 TLR1Q15399 786 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 IRAK1BP1Q5VVH5 260 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 MRM1Q6IN84 353 aaKnown RBP14.98□□□□□ -0.01
RAB5C-201ENST00000346213 GPRIN3Q6ZVF9 776 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 MMP21Q8N119 569 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 PTPMT1Q8WUK0 201 aaPredicted RBP14.98□□□□□ -0.01
RAB5C-201ENST00000346213 TM9SF4Q92544 642 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 C3orf30Q96M34 536 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 PNO1Q9NRX1 252 aaKnown RBP14.98□□□□□ -0.01
RAB5C-201ENST00000346213 STMN3Q9NZ72 180 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 MMACHCQ9Y4U1 282 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 ANGPTL3Q9Y5C1 460 aa14.98□□□□□ -0.01
RAB5C-201ENST00000346213 LOC100653049A0A140TA62 436 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 OR5H15A6NDH6 313 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 PSMD12O00232 456 aaPredicted RBP14.97□□□□□ -0.01
RAB5C-201ENST00000346213 PIP5K1BO14986 540 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 VPS4BO75351 444 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 CRCPO75575 148 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 KRT34O76011 436 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 NEURL1O76050 574 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 MST1P26927 711 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 TPP2P29144 1249 aaPredicted RBP14.97□□□□□ -0.01
RAB5C-201ENST00000346213 PIK3CBP42338 1070 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 SSR2P43308 183 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 HTR6P50406 440 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 SQLEQ14534 574 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 EXT1Q16394 746 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 HIST2H2ACQ16777 129 aaPredicted RBP14.97□□□□□ -0.01
RAB5C-201ENST00000346213 HIST2H2AA3Q6FI13 130 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 SPINK14Q6IE38 97 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 OR4C11Q6IEV9 310 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 NIPAL1Q6NVV3 410 aa14.97□□□□□ -0.01
RAB5C-201ENST00000346213 THAP3Q8WTV1 239 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms