RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 RASGRP3Q8IV61 690 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 ABHD11Q8NFV4 315 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 OR5P2Q8WZ92 322 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 C11orf24Q96F05 449 aaPredicted RBP9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 CNRIP1Q96F85 164 aaPredicted RBP9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 KLHDC7BQ96G42 594 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 NODALQ96S42 347 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 APOL4Q9BPW4 351 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 ZNF717Q9BY31 904 aaPredicted RBP9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 DNAAF2Q9NVR5 837 aaKnown RBP9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 SNX7Q9UNH6 387 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 NTNG1Q9Y2I2 539 aa9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 ZNF106Q9H2Y7 1883 aaKnown RBP9.62□□□□□ -0.87
RBFOX1-202ENST00000340209 SLC1A7O00341 560 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 GCM2O75603 506 aaPredicted RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 FESP07332 822 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 CSNK2A2P19784 350 aaPredicted RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 STT3AP46977 705 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 CLK3P49761 638 aaKnown RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 RPL6Q02878 288 aaKnown RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 ABHD17CQ6PCB6 329 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 RRM2BQ7LG56 351 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 ADAMTS15Q8TE58 950 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 NPLQ9BXD5 320 aaPredicted RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 RAB11FIP5Q9BXF6 653 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 C1GALT1Q9NS00 363 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 EHD3Q9NZN3 535 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 MMP17Q9ULZ9 603 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 CEPT1Q9Y6K0 416 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 NUP210Q8TEM1 1887 aaPredicted RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 CACNA1CQ13936 2221 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 TRBV4-1A0A0J9YWV2 114 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 BNIP3Q12983 259 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 EXOSC7Q15024 291 aaKnown RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 MSANTD1Q6ZTZ1 278 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 BCDIN3DQ7Z5W3 292 aaKnown RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 SLC22A18ASQ8N1D0 253 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 CLIP4Q8N3C7 705 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 AVL9Q8NBF6 648 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 OR2L5Q8NG80 312 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 ABTB1Q969K4 478 aaPredicted RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 ISOC1Q96CN7 298 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 AMDHD1Q96NU7 426 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 ALPK1Q96QP1 1244 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 TREX2Q9BQ50 279 aaPredicted RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 MENTQ9BUN1 341 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 LHPPQ9H008 270 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 WASH6PQ9NQA3 447 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 TAS2R16Q9NYV7 291 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 SLC6A14Q9UN76 642 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 PCDHGB3Q9Y5G1 929 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 PCDHGA4Q9Y5G9 962 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 LOC100506127A0A0U1RQW1 187 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 FAM170BA6NMN3 283 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 H0YJX3 145 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 RDH16O75452 317 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 TNFRSF21O75509 655 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 ZNF182P17025 639 aaPredicted RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 ALAS2P22557 587 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 PGDP52209 483 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 MAT1AQ00266 395 aaKnown RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 NPRL3Q12980 569 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 TARDBPQ13148 414 aaKnown RBP eCLIP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 TMED1Q13445 227 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 NPTX1Q15818 432 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 ZNF630Q2M218 657 aaPredicted RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 NKAIN2Q5VXU1 208 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 FAM111BQ6SJ93 734 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 USP53Q70EK8 1073 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 LACC1Q8IV20 430 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 Q8N9G6 341 aaPredicted RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 NUP43Q8NFH3 380 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 GEMIN6Q8WXD5 167 aaKnown RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 ZG16BQ96DA0 208 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 CACYBPQ9HB71 228 aaKnown RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 MAPRE3Q9UPY8 281 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 A8MUA0 341 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 ADAMDEC1O15204 470 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 CASC3O15234 703 aaKnown RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 CLEC3AO75596 197 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 CH25HO95992 272 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 RYKP34925 604 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 MVDP53602 400 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 TGM3Q08188 693 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 MADCAM1Q13477 382 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 MLIPQ5VWP3 458 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 FIGNL1Q6PIW4 674 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 SIX5Q8N196 739 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 CREB3L4Q8TEY5 395 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 TGM7Q96PF1 710 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 ZNF300Q96RE9 604 aaPredicted RBP9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 MAGIXQ9H6Y5 334 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 KIR3DX1Q9H7L2 352 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 NEUROD4Q9HD90 331 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 LYVE1Q9Y5Y7 322 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 HEBP2Q9Y5Z4 205 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 MAU2Q9Y6X3 613 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 COMMD3-BMI1R4GMX3 469 aa9.61□□□□□ -0.87
RBFOX1-202ENST00000340209 H0YGG7 62 aa9.6□□□□□ -0.87
RBFOX1-202ENST00000340209 HCRTR1O43613 425 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms