RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 SNX8Q9Y5X2 465 aa10.14□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PRAMEF27A3QJZ7 478 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 TNFSF14O43557 240 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 SEMA7AO75326 666 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 APBB3O95704 486 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 LGI1O95970 557 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 GASTP01350 101 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 H1F0P07305 194 aaKnown RBP10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 FHP07954 510 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 CD36P16671 472 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PSMB9P28065 219 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 SLC19A1P41440 591 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 RPS15AP62244 130 aaKnown RBP10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 CYP4F2P78329 520 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 OCLNQ16625 522 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 ATAT1Q5SQI0 421 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 DCST1Q5T197 706 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 DUS1LQ6P1R4 473 aaKnown RBP10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PAQR7Q86WK9 346 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 UBE2FQ969M7 185 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 HSPBAP1Q96EW2 488 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 OR2M4Q96R27 311 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PINK1Q9BXM7 581 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 S1PR5Q9H228 398 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PRM3Q9NNZ6 103 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 CALML5Q9NZT1 146 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 CCDC59Q9P031 241 aaKnown RBP10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 A4GNTQ9UNA3 340 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 LIPT1Q9Y234 373 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 CFAP20Q9Y6A4 193 aaKnown RBP10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 TICRRQ7Z2Z1 1910 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 ANHXE9PGG2 379 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 M0R3G1 203 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 VIPP01282 170 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 F3P13726 295 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 ENDOUP21128 410 aaKnown RBP10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 RHAGQ02094 409 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 SPDYE7PQ495Y7 208 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 TMEM196Q5HYL7 178 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 C9orf50Q5SZB4 431 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 TNFAIP8L2Q6P589 184 aaPredicted RBP10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 DCDC5Q6ZRR9 648 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 MRGPREQ86SM8 312 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 MFSD4AQ8N468 514 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 C2orf73Q8N5S3 287 aaPredicted RBP10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 ACOT4Q8N9L9 421 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 FGF14Q92915 247 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 GAL3ST3Q96A11 431 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 ZNF681Q96N22 645 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 RHNO1Q9BSD3 238 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 TMEM121BQ9BXQ6 578 aaPredicted RBP10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 MMP27Q9H306 513 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 OR51I1Q9H343 314 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 IMPAD1Q9NX62 359 aa10.13□□□□□ -0.79
TRAF3IP2-201ENST00000340026 A0A1W2PQF6 199 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PRSS38A1L453 326 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 ZBTB11O95625 1053 aaPredicted RBP10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 AGR2O95994 175 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 ADORA3P0DMS8 318 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 SMIM10L1P0DMW3 83 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 CD40LGP29965 261 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 OPRL1P41146 370 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 CTSKP43235 329 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 MAN2A2P49641 1150 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 HSPB3Q12988 150 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 SDE2Q6IQ49 451 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PARM1Q6UWI2 310 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 USP43Q70EL4 1123 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 SLCO6A1Q86UG4 719 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 TAGAPQ8N103 731 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 EXOSC8Q96B26 276 aaKnown RBP10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 TM4SF19Q96DZ7 209 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 SMIM10Q96HG1 83 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PRRC1Q96M27 445 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 MKRN2Q9H000 416 aaKnown RBP10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 IMP3Q9NV31 184 aaKnown RBP10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 CLN6Q9NWW5 311 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 SEC14L3Q9UDX4 400 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 SLC9A8Q9Y2E8 581 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PCDHGA3Q9Y5H0 932 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 LRP4O75096 1905 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 MYO10Q9HD67 2058 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 TRBV4-1A0A0J9YWV2 114 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 FAM221BA6H8Z2 402 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 A6NCN8 305 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 ANTXRLA6NF34 631 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 HAT1O14929 419 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PROM1O43490 865 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 LCKP06239 509 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 UGT2B15P54855 530 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 PRR5P85299 388 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 EFNB1P98172 346 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 HYAL1Q12794 435 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 SLAMF1Q13291 335 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 NFATC4Q14934 902 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 KIR2DS3Q14952 304 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 NCF4Q15080 339 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 TIGD6Q17RP2 521 aa10.12□□□□□ -0.79
TRAF3IP2-201ENST00000340026 TIMM50Q3ZCQ8 353 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms