RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 IRF9Q00978 393 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 CUL3Q13618 768 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 ZNF267Q14586 743 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-202ENST00000337571 HYAL4Q2M3T9 481 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 ZNF791Q3KP31 576 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-202ENST00000337571 EMC4Q5J8M3 183 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 C6orf163Q5TEZ5 329 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 CES4AQ5XG92 561 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 HLA-DQA1Q5Y7H0 255 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 TTC19Q6DKK2 380 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-202ENST00000337571 METTL2BQ6P1Q9 378 aaKnown RBP9.84□□□□□ -0.83
CAPN3-202ENST00000337571 SYT10Q6XYQ8 523 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 CCDC71Q8IV32 467 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-202ENST00000337571 TAGAPQ8N103 731 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 LIX1Q8N485 282 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 RNF175Q8N4F7 328 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 MYRIPQ8NFW9 859 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 JSRP1Q96MG2 331 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-202ENST00000337571 GAL3ST4Q96RP7 486 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 ZNF559Q9BR84 538 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 ERVK-6Q9BXR3 956 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 VPS11Q9H270 941 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 SNX15Q9NRS6 342 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 PSD3Q9NYI0 1048 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 AHSPQ9NZD4 102 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 CPSF2Q9P2I0 782 aaKnown RBP9.84□□□□□ -0.83
CAPN3-202ENST00000337571 B4GALT7Q9UBV7 327 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 ERVK-19Q9WJR5 959 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 IKBKGQ9Y6K9 419 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 CACNA1CQ13936 2221 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 PKDREJQ9NTG1 2253 aa9.84□□□□□ -0.83
CAPN3-202ENST00000337571 HCFC1P51610 2035 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 C2orf92A0A1B0GVN3 265 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 GLOD5A6NK44 160 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 FOXE1O00358 373 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-202ENST00000337571 TP53I11O14683 189 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 HCN1O60741 890 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 ZNF354AO60765 605 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-202ENST00000337571 TOXO94900 526 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 IGKV3-11P04433 115 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 SLC35E2P0CK97 266 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 NR2F6P10588 404 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 MTHFD2P13995 350 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 GABRA1P14867 456 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 PIK3R1P27986 724 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 SERPINB8P50452 374 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 NR0B1P51843 470 aaKnown RBP9.83□□□□□ -0.84
CAPN3-202ENST00000337571 HNRNPH2P55795 449 aaKnown RBP9.83□□□□□ -0.84
CAPN3-202ENST00000337571 SLC7A5Q01650 507 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 CKAP4Q07065 602 aaKnown RBP9.83□□□□□ -0.84
CAPN3-202ENST00000337571 FOXO1Q12778 655 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 MYBPHQ13203 477 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 PCBP2Q15366 365 aaKnown RBP eCLIP9.83□□□□□ -0.84
CAPN3-202ENST00000337571 TRADDQ15628 312 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 TMEM198Q66K66 360 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 C8orf74Q6P047 294 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 ZDHHC24Q6UX98 284 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 CDH24Q86UP0 819 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 NUDT13Q86X67 352 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 C9orf40Q8IXQ3 194 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 CENPLQ8N0S6 344 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-202ENST00000337571 RPRMLQ8N4K4 120 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 PAQR8Q8TEZ7 354 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 SPACA9Q96E40 222 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-202ENST00000337571 SERPINI1Q99574 410 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 TTYH2Q9BSA4 534 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 TSPYL1Q9H0U9 437 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 NOL11Q9H8H0 719 aaKnown RBP9.83□□□□□ -0.84
CAPN3-202ENST00000337571 DDX31Q9H8H2 851 aaKnown RBP9.83□□□□□ -0.84
CAPN3-202ENST00000337571 ZFP64Q9NPA5 681 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 MTRF1LQ9UGC7 380 aaKnown RBP9.83□□□□□ -0.84
CAPN3-202ENST00000337571 TMCO1Q9UM00 188 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 RNF11Q9Y3C5 154 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 ASB4Q9Y574 426 aa9.83□□□□□ -0.84
CAPN3-202ENST00000337571 A0A1W2PR48 441 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 RNF223E7ERA6 249 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 HRKO00198 91 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 SMIM24O75264 130 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 GUCY1B2O75343 617 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 EEDO75530 441 aaKnown RBP9.82□□□□□ -0.84
CAPN3-202ENST00000337571 TRAPPC6AO75865 159 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 INHBAP08476 426 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 CELA3AP09093 270 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 RBP1P09455 135 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 GLI4P10075 376 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 MSX1P28360 303 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 GALNSP34059 522 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 BSGP35613 385 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 NEK2P51955 445 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 CCNG1P51959 295 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 NRG3P56975 720 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 SLC37A1P57057 533 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 KRTAP10-9P60411 292 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 RPP38P78345 283 aaKnown RBP9.82□□□□□ -0.84
CAPN3-202ENST00000337571 GUCY2DQ02846 1103 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 IFT88Q13099 833 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 SPRED3Q2MJR0 410 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 TBCELQ5QJ74 424 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 C1orf185Q5T7R7 199 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 PRAMEF20Q5VT98 475 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms