RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 KCNJ3P48549 501 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 RBMS2Q15434 407 aaKnown RBP11.31□□□□□ -0.6
LIMK2-202ENST00000333611 CHRNA6Q15825 494 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 ETFDHQ16134 617 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 FAM180BQ6P0A1 224 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 GPALPP1Q8IXQ4 340 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 DNAJC22Q8N4W6 341 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 ATOH1Q92858 354 aaPredicted RBP11.31□□□□□ -0.6
LIMK2-202ENST00000333611 FBXO17Q96EF6 278 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 RNFT2Q96EX2 444 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 METTL17Q9H7H0 456 aaPredicted RBP11.31□□□□□ -0.6
LIMK2-202ENST00000333611 ZFYVE1Q9HBF4 777 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 C14orf105Q9NVL8 296 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 ELF5Q9UKW6 265 aaPredicted RBP11.31□□□□□ -0.6
LIMK2-202ENST00000333611 NAALAD2Q9Y3Q0 740 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 OR10H1Q9Y4A9 318 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 CHD5Q8TDI0 1954 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 BRCA1P38398 1863 aaKnown RBP11.31□□□□□ -0.6
LIMK2-202ENST00000333611 FXYD6-FXYD2A0A087WZ82 144 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 CELF2O95319 508 aaKnown RBP11.31□□□□□ -0.6
LIMK2-202ENST00000333611 RLN2P04090 185 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 AKR1A1P14550 325 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 JUNDP17535 347 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 SRP9P49458 86 aaKnown RBP11.31□□□□□ -0.6
LIMK2-202ENST00000333611 FLI1Q01543 452 aaPredicted RBP11.31□□□□□ -0.6
LIMK2-202ENST00000333611 UBE2R2Q712K3 238 aaPredicted RBP11.31□□□□□ -0.6
LIMK2-202ENST00000333611 CCDC36Q8IYA8 594 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 OR4D10Q8NGI6 311 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 SFXN2Q96NB2 322 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 GDF15Q99988 308 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 FXYD6Q9H0Q3 95 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 KLHL1Q9NR64 748 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 PSORS1C1Q9UIG5 152 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 PPT2Q9UMR5 302 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 SLC22A7Q9Y694 548 aa11.31□□□□□ -0.6
LIMK2-202ENST00000333611 GNG14A0A1W2PPG7 69 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 SEPT4O43236 478 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 SPDEFO95238 335 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 GJA1P17302 382 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 ATP6V1E1P36543 226 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 ADAM15Q13444 863 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 FBXO43Q4G163 708 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 SHQ1Q6PI26 577 aaKnown RBP11.3□□□□□ -0.6
LIMK2-202ENST00000333611 PAQR7Q86WK9 346 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 ZSWIM9Q86XI8 627 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 RNF130Q86XS8 419 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 PGBD3Q8N328 593 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 OXR1Q8N573 874 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 OR9Q2Q8NGE9 314 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 NELL1Q92832 810 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 TCEAL3Q969E4 200 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 KLHL15Q96M94 604 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 DDOQ99489 341 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 CLN6Q9NWW5 311 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 TNS1Q9HBL0 1735 aaKnown RBP11.3□□□□□ -0.6
LIMK2-202ENST00000333611 IGLV3-10A0A075B6K4 115 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 MPC2O95563 127 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 ASGR1P07306 291 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 CLINT1Q14677 625 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 PCBP2Q15366 365 aaKnown RBP eCLIP11.3□□□□□ -0.6
LIMK2-202ENST00000333611 IDNKQ5T6J7 187 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 LDLRAD1Q5T700 205 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 TSPAN33Q86UF1 283 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 RBFAQ8N0V3 343 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 SYNPOQ8N3V7 929 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 SLC5A8Q8N695 610 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 ZNF454Q8N9F8 522 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 RELL2Q8NC24 303 aaPredicted RBP11.3□□□□□ -0.6
LIMK2-202ENST00000333611 REPS1Q96D71 796 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 EID2BQ96D98 161 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 COPS8Q99627 209 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 CPPED1Q9BRF8 314 aaPredicted RBP11.3□□□□□ -0.6
LIMK2-202ENST00000333611 PIGUQ9H490 435 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 CLMPQ9H6B4 373 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 PDFQ9HBH1 243 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 SEC14L4Q9UDX3 406 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 NEUROG3Q9Y4Z2 214 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 TEX13CA0A0J9YWL9 993 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 DRGXA6NNA5 263 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 DISC1C4P0D8 188 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 LDOC1O95751 146 aaPredicted RBP11.3□□□□□ -0.6
LIMK2-202ENST00000333611 ACADMP11310 421 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 ACPPP15309 386 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 SDC1P18827 310 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 TYMPP19971 482 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 KDELR2P33947 212 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 CLCNKAP51800 687 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 CDC42P60953 191 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 TNFRSF17Q02223 184 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 ABHD18Q0P651 414 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 SFRP5Q5T4F7 317 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 GPR139Q6DWJ6 353 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 C3P1Q6ZMU1 363 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 RFLNAQ6ZTI6 216 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 SHFQ7M4L6 423 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 KIAA0907Q7Z7F0 614 aaPredicted RBP11.3□□□□□ -0.6
LIMK2-202ENST00000333611 GPAT4Q86UL3 456 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 ADGRG3Q86Y34 549 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 LMNTD1Q8N9Z9 388 aa11.3□□□□□ -0.6
LIMK2-202ENST00000333611 GANCQ8TET4 914 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms