RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 PRAMEF10O60809 474 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 MITFO75030 526 aaPredicted RBP13.19□□□□□ -0.3
TRAIP-201ENST00000331456 C8orf89P0DMQ9 161 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 PAX7P23759 505 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 RYKP34925 604 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 HLCSP50747 726 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 PRKAG1P54619 331 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 ARF3P61204 181 aaPredicted RBP13.19□□□□□ -0.3
TRAIP-201ENST00000331456 CEBPEQ15744 281 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 DEFB134Q4QY38 66 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 RPS26P11Q5JNZ5 115 aaPredicted RBP13.19□□□□□ -0.3
TRAIP-201ENST00000331456 ZNF691Q5VV52 312 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 KLHL35Q6PF15 583 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 TSEN54Q7Z6J9 526 aaKnown RBP13.19□□□□□ -0.3
TRAIP-201ENST00000331456 GKN2Q86XP6 184 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 SUN3Q8TAQ9 357 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 XAGE5Q8WWM1 108 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 PIP5K1AQ99755 562 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 ADNPQ9H2P0 1102 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 DOLKQ9UPQ8 538 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 ENPP4Q9Y6X5 453 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 SPACA6W5XKT8 324 aa13.19□□□□□ -0.3
TRAIP-201ENST00000331456 LOC105369274A0A096LPK9 316 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 LOC102723532A0A0G2JNH3 316 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 OR6B1O95007 311 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 CSF2P04141 144 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 EIF2S1P05198 315 aaKnown RBP13.18□□□□□ -0.3
TRAIP-201ENST00000331456 PVRP15151 417 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 IL9P15248 144 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 ALOX12P18054 663 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 RHCEP18577 417 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 EEF1B2P24534 225 aaKnown RBP13.18□□□□□ -0.3
TRAIP-201ENST00000331456 ELK4P28324 431 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 XCR1P46094 333 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 CDH12P55289 794 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 RACK1P63244 317 aaKnown RBP13.18□□□□□ -0.3
TRAIP-201ENST00000331456 KEAP1Q14145 624 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 FRMPD2BQ6IN97 320 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 TMEM107Q6UX40 140 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 SFTPA2Q8IWL1 248 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 OR4N4Q8N0Y3 316 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 DEFB119Q8N690 84 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 TTC29Q8NA56 475 aaPredicted RBP13.18□□□□□ -0.3
TRAIP-201ENST00000331456 ADAMTS16Q8TE57 1224 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 SPATA5L1Q9BVQ7 753 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 CHRDQ9H2X0 955 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 SERHL2Q9H4I8 314 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 EVA1BQ9NVM1 165 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 PCDHGA8Q9Y5G5 932 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 SLCO1B1Q9Y6L6 691 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 HSPE1-MOB4S4R3N1 261 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 A0A1W2PR77 199 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 SOX1O00570 391 aaPredicted RBP13.18□□□□□ -0.3
TRAIP-201ENST00000331456 MFN2O95140 757 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 FESP07332 822 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 ANXA8P13928 327 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 NME1P15531 152 aaKnown RBP13.18□□□□□ -0.3
TRAIP-201ENST00000331456 LSSP48449 732 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 PXNP49023 591 aaPredicted RBP13.18□□□□□ -0.3
TRAIP-201ENST00000331456 CRISP3P54108 245 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 LIM2P55344 173 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 GPR19Q15760 415 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 ZNF750Q32MQ0 723 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 C6orf141Q5SZD1 244 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 DGLUCYQ7Z3D6 616 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 LRRC25Q8N386 305 aaPredicted RBP13.18□□□□□ -0.3
TRAIP-201ENST00000331456 OR4K14Q8NGD5 310 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 BBS10Q8TAM1 723 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 MIPOL1Q8TD10 442 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 ZNF681Q96N22 645 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 APOL4Q9BPW4 351 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 CCDC3Q9BQI4 270 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 SEMA6CQ9H3T2 930 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 LYRM4Q9HD34 91 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 VCX3AQ9NNX9 186 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 KCMF1Q9P0J7 381 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 SEC14L3Q9UDX4 400 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 DAPP1Q9UN19 280 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 GMPPBQ9Y5P6 360 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 TRIOBPQ9H2D6 2365 aa13.18□□□□□ -0.3
TRAIP-201ENST00000331456 TLR4O00206 839 aa13.17□□□□□ -0.3
TRAIP-201ENST00000331456 WNT1P04628 370 aa13.17□□□□□ -0.3
TRAIP-201ENST00000331456 HMGN2P05204 90 aaKnown RBP13.17□□□□□ -0.3
TRAIP-201ENST00000331456 ALPPL2P10696 532 aa13.17□□□□□ -0.3
TRAIP-201ENST00000331456 CD247P20963 164 aa13.17□□□□□ -0.3
TRAIP-201ENST00000331456 YAP1P46937 504 aaKnown RBP13.17□□□□□ -0.3
TRAIP-201ENST00000331456 IL5RAQ01344 420 aa13.17□□□□□ -0.3
TRAIP-201ENST00000331456 RPL6Q02878 288 aaKnown RBP13.17□□□□□ -0.3
TRAIP-201ENST00000331456 DUSP2Q05923 314 aa13.17□□□□□ -0.3
TRAIP-201ENST00000331456 CD47Q08722 323 aa13.17□□□□□ -0.3
TRAIP-201ENST00000331456 SIM2Q14190 667 aaPredicted RBP13.17□□□□□ -0.3
TRAIP-201ENST00000331456 SYPL1Q16563 259 aa13.17□□□□□ -0.3
TRAIP-201ENST00000331456 DUSP7Q16829 419 aa13.17□□□□□ -0.3
TRAIP-201ENST00000331456 CYP27C1Q4G0S4 372 aa13.17□□□□□ -0.3
TRAIP-201ENST00000331456 GPR141Q7Z602 305 aa13.17□□□□□ -0.3
TRAIP-201ENST00000331456 ZNF761Q86XN6 746 aaPredicted RBP13.17□□□□□ -0.3
TRAIP-201ENST00000331456 SIX5Q8N196 739 aa13.17□□□□□ -0.3
TRAIP-201ENST00000331456 SPEM1Q8N4L4 309 aa13.17□□□□□ -0.3
TRAIP-201ENST00000331456 CSNK1A1LQ8N752 337 aa13.17□□□□□ -0.3
TRAIP-201ENST00000331456 CHDHQ8NE62 594 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms