RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ZNF416Q9BWM5 594 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 IFT22Q9H7X7 185 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 MFSD2BA6NFX1 497 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 KPNA5O15131 536 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 WDR5P61964 334 aaKnown RBP23.14■■□□□ 1.29
SOX1-201ENST00000330949 CPTPQ5TA50 214 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 ANXA8L1Q5VT79 327 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 FRG2Q64ET8 278 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 CD200R1LQ6Q8B3 271 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 ASB18Q6ZVZ8 466 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 OVCH2Q7RTZ1 564 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 LKAAEAR1Q8TD35 194 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 SENP5Q96HI0 755 aaPredicted RBP23.14■■□□□ 1.29
SOX1-201ENST00000330949 COQ10AQ96MF6 247 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 FRG2BQ96QU4 278 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 PADI3Q9ULW8 664 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 HEPACAM2A8MVW5 462 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 SOX14O95416 240 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 SOD1P00441 154 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 RAB3AP20336 220 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 GCNT6Q5T4J0 391 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 LRRC70Q7Z2Q7 622 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 MON1AQ86VX9 555 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 TTC9BQ8N6N2 239 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 SYT17Q9BSW7 474 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 REG4Q9BYZ8 158 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 SCP2D1Q9UJQ7 156 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 TRDV1A0A1B0GX56 115 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 SERTM1A2A2V5 107 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 SCAMP2O15127 329 aaKnown RBP23.13■■□□□ 1.29
SOX1-201ENST00000330949 PAHP00439 452 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 HOXB1P14653 301 aaPredicted RBP23.13■■□□□ 1.29
SOX1-201ENST00000330949 XKP51811 444 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 CEACAM20Q6UY09 585 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 BCDIN3DQ7Z5W3 292 aaKnown RBP23.13■■□□□ 1.29
SOX1-201ENST00000330949 OR2T4Q8NH00 348 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 NLNQ9BYT8 704 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 DPAGT1Q9H3H5 408 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 PCDHB16Q9NRJ7 776 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 GMEB2Q9UKD1 530 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 PCDHB7Q9Y5E2 793 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 GREB1Q4ZG55 1949 aa23.13■■□□□ 1.29
SOX1-201ENST00000330949 UPK3BL1B0FP48 263 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 UPK3BL2E5RIL1 263 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 CASC3O15234 703 aaKnown RBP23.12■■□□□ 1.29
SOX1-201ENST00000330949 USP45Q70EL2 814 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 L3MBTL4Q8NA19 623 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 THAP7Q9BT49 309 aaPredicted RBP23.12■■□□□ 1.29
SOX1-201ENST00000330949 ARL15Q9NXU5 204 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 RHCGQ9UBD6 479 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 EXTL2Q9UBQ6 330 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 PRG3Q9Y2Y8 225 aaPredicted RBP23.12■■□□□ 1.29
SOX1-201ENST00000330949 TRPV2Q9Y5S1 764 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 NUBP2Q9Y5Y2 271 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 CACNG2Q9Y698 323 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 MEIKINA0A087WXM9 373 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 IFNW1P05000 195 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 ETFAP13804 333 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 C4BPBP20851 252 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 NTRK2Q16620 822 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 LURAP1LQ8IV03 231 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 HUS1BQ8NHY5 278 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 NFKBIDQ8NI38 313 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 ADAM2Q99965 735 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 DPYSL5Q9BPU6 564 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 HCN3Q9P1Z3 774 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 TESQ9UGI8 421 aaKnown RBP23.12■■□□□ 1.29
SOX1-201ENST00000330949 PCDHGC4Q9Y5F7 938 aa23.12■■□□□ 1.29
SOX1-201ENST00000330949 TEX13CA0A0J9YWL9 993 aa23.11■■□□□ 1.29
SOX1-201ENST00000330949 TMEM129A0AVI4 362 aa23.11■■□□□ 1.29
SOX1-201ENST00000330949 KIAA0907Q7Z7F0 614 aaPredicted RBP23.11■■□□□ 1.29
SOX1-201ENST00000330949 SIPA1Q96FS4 1042 aa23.11■■□□□ 1.29
SOX1-201ENST00000330949 MED9Q9NWA0 146 aa23.11■■□□□ 1.29
SOX1-201ENST00000330949 MGAT4BQ9UQ53 548 aa23.11■■□□□ 1.29
SOX1-201ENST00000330949 RUVBL1Q9Y265 456 aaKnown RBP23.11■■□□□ 1.29
SOX1-201ENST00000330949 MKI67P46013 3256 aaKnown RBP23.11■■□□□ 1.29
SOX1-201ENST00000330949 HOXB3P14651 431 aaPredicted RBP23.11■■□□□ 1.29
SOX1-201ENST00000330949 CR2P20023 1033 aa23.11■■□□□ 1.29
SOX1-201ENST00000330949 HOXD9P28356 352 aaPredicted RBP23.11■■□□□ 1.29
SOX1-201ENST00000330949 RPL6Q02878 288 aaKnown RBP23.11■■□□□ 1.29
SOX1-201ENST00000330949 C2orf80Q0P641 193 aa23.11■■□□□ 1.29
SOX1-201ENST00000330949 CDKL4Q5MAI5 379 aa23.11■■□□□ 1.29
SOX1-201ENST00000330949 SERPINA9Q86WD7 417 aa23.11■■□□□ 1.29
SOX1-201ENST00000330949 CFAP52Q8N1V2 620 aa23.11■■□□□ 1.29
SOX1-201ENST00000330949 PIAS4Q8N2W9 510 aaPredicted RBP23.11■■□□□ 1.29
SOX1-201ENST00000330949 OR8D4Q8NGM9 314 aa23.11■■□□□ 1.29
SOX1-201ENST00000330949 PELOQ9BRX2 385 aaKnown RBP23.11■■□□□ 1.29
SOX1-201ENST00000330949 FAM227AF5H4B4 570 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 SH3BP5O60239 455 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 B4GALT3O60512 393 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 GAAP10253 952 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 RPIAP49247 311 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 CRB2Q5IJ48 1285 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 OR2G6Q5TZ20 316 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 RAET1GQ6H3X3 334 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 WDR53Q7Z5U6 358 aaPredicted RBP23.1■■□□□ 1.29
SOX1-201ENST00000330949 FAM26EQ8N5C1 309 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 UBL7Q96S82 380 aaPredicted RBP23.1■■□□□ 1.29
SOX1-201ENST00000330949 DLL4Q9NR61 685 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 KCND3Q9UK17 655 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms