RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 TMEM179BQ7Z7N9 219 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 AMZ2Q86W34 360 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 SLC30A8Q8IWU4 369 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 SPAG16Q8N0X2 631 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 PGBD5Q8N414 524 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 TFGQ92734 400 aaPredicted RBP13.41□□□□□ -0.26
EPHB3-201ENST00000330394 CALML5Q9NZT1 146 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 CNIH4Q9P003 139 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 PSORS1C1Q9UIG5 152 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 PRSS21Q9Y6M0 314 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 MARF1Q9Y4F3 1742 aaKnown RBP13.41□□□□□ -0.26
EPHB3-201ENST00000330394 POM121CA8CG34 1229 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 GABRR3A8MPY1 467 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 H7C0S8 307 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 STK25O00506 426 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 ACVR2AP27037 513 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 MPIP34949 423 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 ZNF140P52738 457 aaPredicted RBP13.41□□□□□ -0.26
EPHB3-201ENST00000330394 SCRN3Q0VDG4 424 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 CDK10Q15131 360 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 HLA-DQA1Q5Y7H0 255 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 DHRS4L2Q6PKH6 230 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 LRRN1Q6UXK5 716 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 IL20RBQ6UXL0 311 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 RPTNQ6XPR3 784 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 SERPINA11Q86U17 422 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 JAZF1Q86VZ6 243 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 DCAF4L2Q8NA75 395 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 CD180Q99467 661 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 C11orf54Q9H0W9 315 aaPredicted RBP13.41□□□□□ -0.26
EPHB3-201ENST00000330394 NEUROD4Q9HD90 331 aa13.41□□□□□ -0.26
EPHB3-201ENST00000330394 GRXCR2A6NFK2 248 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 SOBPA7XYQ1 873 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 FZD9O00144 591 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 OR7A17O14581 309 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 NCR1O76036 304 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ADAP00813 363 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 NAA10P41227 235 aaPredicted RBP13.4□□□□□ -0.26
EPHB3-201ENST00000330394 WNT4P56705 351 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 SKP1P63208 163 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ZNF155Q12901 538 aaPredicted RBP13.4□□□□□ -0.26
EPHB3-201ENST00000330394 SEMA3BQ13214 749 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 SLAMF1Q13291 335 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 CCDC58Q4VC31 144 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 CTSL3PQ5NE16 218 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 RAB12Q6IQ22 244 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ZNF627Q7L945 461 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 FOXRED2Q8IWF2 684 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 BOLLQ8N9W6 283 aaKnown RBP13.4□□□□□ -0.26
EPHB3-201ENST00000330394 OR7G3Q8NG95 312 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 DYNC2LI1Q8TCX1 351 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 OR8D1Q8WZ84 308 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 NT5C3BQ969T7 300 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ELMOD3Q96FG2 381 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 MNTQ99583 582 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 GON7Q9BXV9 100 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 YIPF1Q9Y548 306 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 PHLPP1O60346 1717 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 MT-ND5P03915 603 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ACPPP15309 386 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 PSMA3P25788 255 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 CLCNKAP51800 687 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ID2Q02363 134 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 PYCR3Q53H96 274 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 MARCH8Q5T0T0 291 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 PRAMEF17Q5VTA0 474 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 CCSAPQ6IQ19 270 aaPredicted RBP13.4□□□□□ -0.26
EPHB3-201ENST00000330394 PEG10Q86TG7 708 aaKnown RBP13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ARMC10Q8N2F6 343 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ZNF615Q8N8J6 731 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 TMEM145Q8NBT3 493 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 RGMAQ96B86 450 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 RNF31Q96EP0 1072 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 NIPSNAP1Q9BPW8 284 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ZNF471Q9BX82 626 aaPredicted RBP13.4□□□□□ -0.26
EPHB3-201ENST00000330394 PLCL2Q9UPR0 1127 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 NME7Q9Y5B8 376 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 CSNK1G3Q9Y6M4 447 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 MROH6A6NGR9 719 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ZNF821O75541 412 aaPredicted RBP13.4□□□□□ -0.26
EPHB3-201ENST00000330394 EOMESO95936 686 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ACP5P13686 325 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 VSX2P58304 361 aaPredicted RBP13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ZNF91Q05481 1191 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 TMEM115Q12893 351 aaPredicted RBP13.4□□□□□ -0.26
EPHB3-201ENST00000330394 BTN1A1Q13410 526 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 VEZF1Q14119 521 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 TRAM2Q15035 370 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 SWI5Q1ZZU3 235 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 HSD17B12Q53GQ0 312 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ELP2Q6IA86 826 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 PDZD3Q86UT5 571 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 FAM124AQ86V42 546 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ACBD7Q8N6N7 88 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 OR52N2Q8NGI0 321 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 PMEPA1Q969W9 287 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 RERGQ96A58 199 aaPredicted RBP13.4□□□□□ -0.26
EPHB3-201ENST00000330394 KXD1Q9BQD3 176 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 SLC39A1Q9NY26 324 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ERVW-1Q9UQF0 538 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms