RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 TRANK1O15050 2925 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 CACNB4O00305 520 aaPredicted RBP13.78□□□□□ -0.2
TPM3-206ENST00000330188 MAN2B1O00754 1011 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 AIREO43918 545 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 PTHP01270 115 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 BMP4P12644 408 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 PEBP1P30086 187 aaKnown RBP13.78□□□□□ -0.2
TPM3-206ENST00000330188 GPC1P35052 558 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 UGT2B10P36537 528 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 KIR2DL1P43626 348 aaPredicted RBP13.78□□□□□ -0.2
TPM3-206ENST00000330188 CLK1P49759 484 aaKnown RBP13.78□□□□□ -0.2
TPM3-206ENST00000330188 ITPRIPL2Q3MIP1 535 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 DCST1Q5T197 706 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 DEF8Q6ZN54 512 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 SZRD1Q7Z422 152 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 FBXL6Q8N531 539 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 RASSF5Q8WWW0 418 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 MS4A6EQ96DS6 147 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 FAIM2Q9BWQ8 316 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 SLC17A9Q9BYT1 436 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 UCK2Q9BZX2 261 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 MVB12BQ9H7P6 319 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 ZBTB20Q9HC78 741 aaPredicted RBP13.78□□□□□ -0.2
TPM3-206ENST00000330188 ZSCAN32Q9NX65 697 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 MOSPD1Q9UJG1 213 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 ACAD8Q9UKU7 415 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 GPSM3Q9Y4H4 160 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 SH3D21A4FU49 640 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 TMEM247A6NEH6 219 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 PDZK1P1A8MUH7 402 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 K7EQS6 105 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 FAAHO00519 579 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 PLRG1O43660 514 aaKnown RBP13.77□□□□□ -0.21
TPM3-206ENST00000330188 MPZL2O60487 215 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 OXSR1O95747 527 aaPredicted RBP13.77□□□□□ -0.21
TPM3-206ENST00000330188 H1F0P07305 194 aaKnown RBP13.77□□□□□ -0.21
TPM3-206ENST00000330188 ADRA2AP08913 450 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 OSMP13725 252 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 POU1F1P28069 291 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 NCBP2P52298 156 aaKnown RBP eCLIP13.77□□□□□ -0.21
TPM3-206ENST00000330188 DGKEP52429 567 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 SLAMF1Q13291 335 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 SLC9A5Q14940 896 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 UAP1L1Q3KQV9 507 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 MRM1Q6IN84 353 aaKnown RBP13.77□□□□□ -0.21
TPM3-206ENST00000330188 PARM1Q6UWI2 310 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 PTCHD4Q6ZW05 846 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 COMTD1Q86VU5 262 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 OR8K5Q8NH50 307 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 OR14C36Q8NHC7 312 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 GANCQ8TET4 914 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 XAGE5Q8WWM1 108 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 FGF14Q92915 247 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 FUZQ9BT04 418 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 MKRN2Q9H000 416 aaKnown RBP13.77□□□□□ -0.21
TPM3-206ENST00000330188 DCSTAMPQ9H295 470 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 FZD3Q9NPG1 666 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 PRDM8Q9NQV8 689 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 PRDM7Q9NQW5 492 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 ZCCHC3Q9NUD5 404 aaKnown RBP13.77□□□□□ -0.21
TPM3-206ENST00000330188 MGAT4BQ9UQ53 548 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 ASB4Q9Y574 426 aa13.77□□□□□ -0.21
TPM3-206ENST00000330188 GLOD5A6NK44 160 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 ERI3O43414 337 aaKnown RBP13.76□□□□□ -0.21
TPM3-206ENST00000330188 KCNJ13O60928 360 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 RNGTTO60942 597 aaKnown RBP13.76□□□□□ -0.21
TPM3-206ENST00000330188 SERPINB7O75635 380 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 HIST1H1TP22492 207 aaPredicted RBP13.76□□□□□ -0.21
TPM3-206ENST00000330188 NTSP30990 170 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 GRK5P34947 590 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 PBX2P40425 430 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 INAQ16352 499 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 RPE65Q16518 533 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 TBC1D25Q3MII6 688 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 FBXO43Q4G163 708 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 ABHD17CQ6PCB6 329 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 SYCE2Q6PIF2 218 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 FAM46DQ8NEK8 389 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 OR2L3Q8NG85 312 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 FAM131CQ96AQ9 280 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 CRELD1Q96HD1 420 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 RPP25Q9BUL9 199 aaKnown RBP13.76□□□□□ -0.21
TPM3-206ENST00000330188 APOOQ9BUR5 198 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 SLC6A17Q9H1V8 727 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 SYNPO2LQ9H987 977 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 C11orf16Q9NQ32 467 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 SEMA3GQ9NS98 782 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 CLN6Q9NWW5 311 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 SPHK1Q9NYA1 384 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 TAS2R16Q9NYV7 291 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 CNOT2Q9NZN8 540 aaKnown RBP13.76□□□□□ -0.21
TPM3-206ENST00000330188 SCHIP1Q9P0W5 487 aaPredicted RBP13.76□□□□□ -0.21
TPM3-206ENST00000330188 TRPC4Q9UBN4 977 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 A4GNTQ9UNA3 340 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 MDC1Q14676 2089 aaKnown RBP13.76□□□□□ -0.21
TPM3-206ENST00000330188 A0A1W2PR48 441 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 EFCAB10A6NFE3 127 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 SCAMP1O15126 338 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 PGRMC2O15173 223 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 OR10H3O60404 316 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms