RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 DNAJC11Q9NVH1 559 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 KCTD5Q9NXV2 234 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 RAB23Q9ULC3 237 aa12.15□□□□□ -0.46
CCDC60-201ENST00000327554 TRDV1A0A1B0GX56 115 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 TLX2O43763 284 aaPredicted RBP12.14□□□□□ -0.47
CCDC60-201ENST00000327554 LZTS3O60299 673 aaPredicted RBP12.14□□□□□ -0.47
CCDC60-201ENST00000327554 SEMA7AO75326 666 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 ETHE1O95571 254 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 CBSLP0DN79 551 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 CBSP35520 551 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 ZNF81P51508 661 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 BTN1A1Q13410 526 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 SPDYE7PQ495Y7 208 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 CD276Q5ZPR3 534 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 ZNF772Q68DY9 489 aaPredicted RBP12.14□□□□□ -0.47
CCDC60-201ENST00000327554 LINGO4Q6UY18 593 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 FAM92BQ6ZTR7 304 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 ZFP41Q8N8Y5 198 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 OR4K1Q8NGD4 311 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 OR52H1Q8NGJ2 320 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 UFD1Q92890 307 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 FGF11Q92914 225 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 FBXW5Q969U6 566 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 SLC12A9Q9BXP2 914 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 TMEM121BQ9BXQ6 578 aaPredicted RBP12.14□□□□□ -0.47
CCDC60-201ENST00000327554 HDHD2Q9H0R4 259 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 CLEC4MQ9H2X3 399 aaPredicted RBP12.14□□□□□ -0.47
CCDC60-201ENST00000327554 RC3H2Q9HBD1 1191 aaKnown RBP12.14□□□□□ -0.47
CCDC60-201ENST00000327554 ISYNA1Q9NPH2 558 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 TVP23BQ9NYZ1 205 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 MGAT4BQ9UQ53 548 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 TRAV6A0A075B6T7 132 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 TMEM129A0AVI4 362 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 ATG13O75143 517 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 APOL3O95236 402 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 CELF2O95319 508 aaKnown RBP12.14□□□□□ -0.47
CCDC60-201ENST00000327554 DHFRP00374 187 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 IFNA14P01570 189 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 ANXA4P09525 319 aaPredicted RBP12.14□□□□□ -0.47
CCDC60-201ENST00000327554 OR56A5P0C7T3 313 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 NR2F6P10588 404 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 ELK1P19419 428 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 ELAVL4P26378 380 aaKnown RBP12.14□□□□□ -0.47
CCDC60-201ENST00000327554 CD79BP40259 229 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 ASMTP46597 345 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 CDH4P55283 916 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 ARF5P84085 180 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 CAMK2DQ13557 499 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 MBTPS1Q14703 1052 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 ARHGAP15Q53QZ3 475 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 ASB18Q6ZVZ8 466 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 MRPL10Q7Z7H8 261 aaKnown RBP12.14□□□□□ -0.47
CCDC60-201ENST00000327554 ARIH2OSQ8N7S6 290 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 ST8SIA4Q92187 359 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 RIT1Q92963 219 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 ZNF582Q96NG8 517 aaPredicted RBP12.14□□□□□ -0.47
CCDC60-201ENST00000327554 C2orf49Q9BVC5 232 aaPredicted RBP12.14□□□□□ -0.47
CCDC60-201ENST00000327554 POLDIP3Q9BY77 421 aaKnown RBP12.14□□□□□ -0.47
CCDC60-201ENST00000327554 CCSER2Q9H7U1 834 aa12.14□□□□□ -0.47
CCDC60-201ENST00000327554 SH3BGRLO75368 114 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 C6orf47O95873 294 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 IFNA16P05015 189 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 ARAFP10398 606 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 ZP3P21754 424 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 CCR7P32248 378 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 CSTF1Q05048 431 aaKnown RBP12.13□□□□□ -0.47
CCDC60-201ENST00000327554 TAF10Q12962 218 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 CHRNA6Q15825 494 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 ZNF630Q2M218 657 aaPredicted RBP12.13□□□□□ -0.47
CCDC60-201ENST00000327554 SPIN4Q56A73 249 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 XKR6Q5GH73 641 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 SLC25A30Q5SVS4 291 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 ADNP2Q6IQ32 1131 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 PGBD2Q6P3X8 592 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 MZT2AQ6P582 158 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 MOB2Q70IA6 237 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 HSD17B8Q92506 261 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 SLC9A6Q92581 669 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 MARC2Q969Z3 335 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 LINC00052Q96N35 136 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 RSPO3Q9BXY4 272 aaPredicted RBP12.13□□□□□ -0.47
CCDC60-201ENST00000327554 REG4Q9BYZ8 158 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 POLR2J3Q9H1A7 115 aaKnown RBP12.13□□□□□ -0.47
CCDC60-201ENST00000327554 OR51J1Q9H342 316 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 NUDT15Q9NV35 164 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 LHX3Q9UBR4 397 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 CRLS1Q9UJA2 301 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 KCNMB2Q9Y691 235 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 CKAP5Q14008 2032 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 A0A1W2PPL8 197 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 PIPSLA2A3N6 862 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 C17orf102A2RUQ5 167 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 PRRG1O14668 218 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 OR10H3O60404 316 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 ACSL4O60488 711 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 LALBAP00709 142 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 RHOCP08134 193 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 SYPP08247 313 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 ACSM4P0C7M7 580 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 SOX18P35713 384 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms