RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 PRPS1L1P21108 318 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 NOXA1Q86UR1 476 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 SLC30A8Q8IWU4 369 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 ARL11Q969Q4 196 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 MMABQ96EY8 250 aaPredicted RBP7.59□□□□□ -1.19
CIITA-201ENST00000324288 MRPL22Q9NWU5 206 aaKnown RBP7.59□□□□□ -1.19
CIITA-201ENST00000324288 DTLQ9NZJ0 730 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 ACTR3BQ9P1U1 418 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 TLR6Q9Y2C9 796 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 C2CD4BA6NLJ0 364 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 HEXBP07686 556 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 HOXC6P09630 235 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 IMPDH1P20839 514 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 ARL2P36404 184 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 NDST2P52849 883 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 TMBIM6P55061 237 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 HNRNPKP61978 463 aaKnown RBP eCLIP7.59□□□□□ -1.19
CIITA-201ENST00000324288 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.59□□□□□ -1.19
CIITA-201ENST00000324288 ZFP82Q8N141 532 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 LGALS12Q96DT0 336 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 OR51B6Q9H340 312 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 PPP4R1LQ9P1A2 415 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 PCDHGB2Q9Y5G2 931 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 OR6C6A6NF89 314 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 TMEM88BA6NKF7 163 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 GRID2O43424 1007 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 RBBP9O75884 186 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 NCR1O76036 304 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 BEST1O76090 585 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 RHOP08100 348 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 GRIA2P42262 883 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 SCGB2A2Q13296 93 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 GNMTQ14749 295 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 CLDN19Q8N6F1 224 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 OR13C3Q8NGS6 347 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 CCM2Q9BSQ5 444 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 LRFN1Q9P244 771 aa7.59□□□□□ -1.19
CIITA-201ENST00000324288 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.59□□□□□ -1.2
CIITA-201ENST00000324288 OR7A17O14581 309 aa7.59□□□□□ -1.2
CIITA-201ENST00000324288 CHRNB1P11230 501 aa7.59□□□□□ -1.2
CIITA-201ENST00000324288 ZNF791Q3KP31 576 aaPredicted RBP7.59□□□□□ -1.2
CIITA-201ENST00000324288 SYPL2Q5VXT5 272 aa7.59□□□□□ -1.2
CIITA-201ENST00000324288 NLGN4YQ8NFZ3 816 aaPredicted RBP7.59□□□□□ -1.2
CIITA-201ENST00000324288 ZNF420Q8TAQ5 688 aaPredicted RBP7.59□□□□□ -1.2
CIITA-201ENST00000324288 PTERQ96BW5 349 aa7.59□□□□□ -1.2
CIITA-201ENST00000324288 PBDC1Q9BVG4 233 aa7.59□□□□□ -1.2
CIITA-201ENST00000324288 GALPQ9UBC7 116 aa7.59□□□□□ -1.2
CIITA-201ENST00000324288 EXOSC1Q9Y3B2 195 aaKnown RBP7.59□□□□□ -1.2
CIITA-201ENST00000324288 FAM159BA6NKW6 160 aa7.59□□□□□ -1.2
CIITA-201ENST00000324288 J3KR12 359 aa7.59□□□□□ -1.2
CIITA-201ENST00000324288 ARPC1BO15143 372 aaKnown RBP7.59□□□□□ -1.2
CIITA-201ENST00000324288 MITFO75030 526 aaPredicted RBP7.59□□□□□ -1.2
CIITA-201ENST00000324288 ASPAP45381 313 aa7.59□□□□□ -1.2
CIITA-201ENST00000324288 KCNQ1P51787 676 aa7.59□□□□□ -1.2
CIITA-201ENST00000324288 CAV3P56539 151 aa7.59□□□□□ -1.2
CIITA-201ENST00000324288 LASP1Q14847 261 aaKnown RBP7.59□□□□□ -1.2
CIITA-201ENST00000324288 ZC3H14Q6PJT7 736 aaKnown RBP7.59□□□□□ -1.2
CIITA-201ENST00000324288 DNM1P34Q6PK57 102 aa7.59□□□□□ -1.2
CIITA-201ENST00000324288 IGFN1Q86VF2 1251 aa7.59□□□□□ -1.2
CIITA-201ENST00000324288 PTPRUQ92729 1446 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 ROBO3Q96MS0 1386 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 UBFD1O14562 309 aaKnown RBP7.58□□□□□ -1.2
CIITA-201ENST00000324288 FXYD4P59646 89 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 TXNRD3NBQ6F5E7 133 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 SLC41A3Q96GZ6 507 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 CDC6Q99741 560 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 ZBTB20Q9HC78 741 aaPredicted RBP7.58□□□□□ -1.2
CIITA-201ENST00000324288 GLS2Q9UI32 602 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 PDYNP01213 254 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 RELAQ04206 551 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 REEP3Q6NUK4 255 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 HAS2Q92819 552 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 NSUN5Q96P11 429 aaKnown RBP7.58□□□□□ -1.2
CIITA-201ENST00000324288 WASF3Q9UPY6 502 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 TRBV2A0A0J9YWF9 115 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 A6NLC8 198 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 A8MT66 165 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 FAM171A2A8MVW0 826 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 JUNDP17535 347 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 L1CAMP32004 1257 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 SPIN4Q56A73 249 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 DLK2Q6UY11 383 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 C4orf32Q8N8J7 132 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 BCL7BQ9BQE9 202 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 MRPS17Q9Y2R5 130 aaKnown RBP7.58□□□□□ -1.2
CIITA-201ENST00000324288 LCHNA4D1U4 455 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 SLC22A2O15244 555 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 FLRT2O43155 660 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 CFHP08603 1231 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 DLDP09622 509 aaKnown RBP7.58□□□□□ -1.2
CIITA-201ENST00000324288 PET100P0DJ07 73 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 POU3F4P49335 361 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 BLKP51451 505 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 PTPRRQ15256 657 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 FCRLBQ6BAA4 426 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 FAM83HQ6ZRV2 1179 aaPredicted RBP7.58□□□□□ -1.2
CIITA-201ENST00000324288 MRPL41Q8IXM3 137 aaKnown RBP7.58□□□□□ -1.2
CIITA-201ENST00000324288 RPLP0P6Q8NHW5 317 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 SUV39H2Q9H5I1 410 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 AK6Q9Y3D8 172 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms