RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 RB1P06400 928 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 C6P13671 934 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 TIA1P31483 386 aaKnown RBP eCLIP14.56□□□□□ -0.08
VARS2-201ENST00000321897 CNR2P34972 360 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 RGS6P49758 472 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 ISL1P61371 349 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 DHCR24Q15392 516 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 PROX2Q3B8N5 592 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 MTFR2Q6P444 385 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 OR5D16Q8NGK9 328 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 FBXL12Q9NXK8 326 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 GRIP1Q9Y3R0 1128 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 BACE2Q9Y5Z0 518 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 A0A1W2PPK0 400 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 CD9P21926 228 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 BTN3A2P78410 334 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 PIN1Q13526 163 aaPredicted RBP14.55□□□□□ -0.08
VARS2-201ENST00000321897 ATG9BQ674R7 924 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 HSDL2Q6YN16 418 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 COQ8AQ8NI60 647 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 GRHL3Q8TE85 626 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 ZBED6CLQ96FA7 236 aaPredicted RBP14.55□□□□□ -0.08
VARS2-201ENST00000321897 HOXD1Q9GZZ0 328 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 REEP4Q9H6H4 257 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 DCAF13Q9NV06 445 aaKnown RBP14.55□□□□□ -0.08
VARS2-201ENST00000321897 INSL6Q9Y581 213 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 IRAK3Q9Y616 596 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 LOXHD1Q8IVV2 1947 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 NPPAP01160 153 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 TYRP1P17643 537 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 DAPP51397 102 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 TATDN3Q17R31 274 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 SHQ1Q6PI26 577 aaKnown RBP14.55□□□□□ -0.08
VARS2-201ENST00000321897 ARL9Q6T311 187 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 ZNF557Q8N988 423 aaPredicted RBP14.55□□□□□ -0.08
VARS2-201ENST00000321897 OR8K5Q8NH50 307 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 ASB15Q8WXK1 588 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 KXD1Q9BQD3 176 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 SLC12A9Q9BXP2 914 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 ABCG5Q9H222 651 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 MRPS30Q9NP92 439 aaKnown RBP14.55□□□□□ -0.08
VARS2-201ENST00000321897 DIABLOQ9NR28 239 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 MRPL15Q9P015 296 aaKnown RBP14.55□□□□□ -0.08
VARS2-201ENST00000321897 RPL36Q9Y3U8 105 aaKnown RBP14.55□□□□□ -0.08
VARS2-201ENST00000321897 LY75O60449 1722 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 LAMP2P13473 410 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 KELP23276 732 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 TLX1P31314 330 aaPredicted RBP14.55□□□□□ -0.08
VARS2-201ENST00000321897 CSNK1DP48730 415 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 FNTBP49356 437 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 SPIN4Q56A73 249 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 GARNL3Q5VVW2 1013 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 FAM109AQ8N4B1 249 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 OR5M11Q96RB7 305 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 ENAMQ9NRM1 1142 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 EXTL2Q9UBQ6 330 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 MGAT4AQ9UM21 535 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 PCDHB11Q9Y5F2 797 aa14.55□□□□□ -0.08
VARS2-201ENST00000321897 FER1L6Q2WGJ9 1857 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 NRXN2Q9P2S2 1712 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 IFNA7P01567 189 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 PIM1P11309 404 aaPredicted RBP14.54□□□□□ -0.08
VARS2-201ENST00000321897 PGDP52209 483 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 COQ5Q5HYK3 327 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 SLC39A11Q8N1S5 342 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 BEST4Q8NFU0 473 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 OR10H4Q8NGA5 316 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 TEFMQ96QE5 360 aaKnown RBP14.54□□□□□ -0.08
VARS2-201ENST00000321897 TSSK6Q9BXA6 273 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 SAV1Q9H4B6 383 aaPredicted RBP14.54□□□□□ -0.08
VARS2-201ENST00000321897 AKIP1Q9NQ31 210 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 MKL2Q9ULH7 1088 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 GRXCR1A8MXD5 290 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 TMEM189-UBE2V1I3L0A0 370 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 M0R3H8 397 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 HLA-DQA2P01906 255 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 APOC3P02656 99 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 NAT1P18440 290 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 DRD5P21918 477 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 SLC6A11P48066 632 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 VEGFBP49765 207 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 PUDPQ08623 228 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 XAF1Q6GPH4 301 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 SLC39A5Q6ZMH5 540 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 B3GNT7Q8NFL0 401 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 GATAD2BQ8WXI9 593 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 ABCD2Q9UBJ2 740 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 EEF1E1O43324 174 aaKnown RBP14.54□□□□□ -0.08
VARS2-201ENST00000321897 H1F0P07305 194 aaKnown RBP14.54□□□□□ -0.08
VARS2-201ENST00000321897 C1GALT1C1LP0DN25 315 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 AOAHP28039 575 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 TGM4P49221 684 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 ERVFC1P60507 584 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 SLC9A5Q14940 896 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 CTF1Q16619 201 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 NDUFAF6Q330K2 333 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 LRRTM4Q86VH4 590 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 MMP21Q8N119 569 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 VWA5B2Q8N398 1253 aa14.54□□□□□ -0.08
VARS2-201ENST00000321897 RASGEF1AQ8N9B8 481 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms