RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 HLA-EP13747 358 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 KELP23276 732 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 ITGA3P26006 1051 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 PTPN6P29350 595 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 CSKP41240 450 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 HNMTP50135 292 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 CCR4P51679 360 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 RPS25P62851 125 aaKnown RBP7.18□□□□□ -1.26
CDHR3-201ENST00000317716 ZNF91Q05481 1191 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 ESCO2Q56NI9 601 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 SLC24A5Q71RS6 500 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 KANSL1Q7Z3B3 1105 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 LACC1Q8IV20 430 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 ZBTB44Q8NCP5 570 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 OR52L1Q8NGH7 329 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 C1orf216Q8TAB5 229 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 MCCC1Q96RQ3 725 aaPredicted RBP7.18□□□□□ -1.26
CDHR3-201ENST00000317716 PIP5K1AQ99755 562 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 PRR14Q9BWN1 585 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 MAGEH1Q9H213 219 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 PLCL2Q9UPR0 1127 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 MGAT4BQ9UQ53 548 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 PCDHB11Q9Y5F2 797 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 C5orf42Q9H799 3197 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 ZDBF2Q9HCK1 2354 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 ALPK2Q86TB3 2170 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 FAM170BA6NMN3 283 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 B4DXG7 233 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 B8ZZF3 427 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 ZNF250P15622 560 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 LHCGRP22888 699 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 CHMP24386 653 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 ITGB8P26012 769 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 RPL9P32969 192 aaKnown RBP7.18□□□□□ -1.26
CDHR3-201ENST00000317716 CTNNB1P35222 781 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 RPL4P36578 427 aaKnown RBP7.18□□□□□ -1.26
CDHR3-201ENST00000317716 IFNGR2P38484 337 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 DOC2AQ14183 400 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 CTSL3PQ5NE16 218 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 FRMPD2BQ6IN97 320 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 MED27Q6P2C8 311 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 XKRXQ6PP77 449 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 IKBIPQ70UQ0 350 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 THOC6Q86W42 341 aaKnown RBP7.18□□□□□ -1.26
CDHR3-201ENST00000317716 CDK20Q8IZL9 346 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 OR51L1Q8NGJ5 315 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.18□□□□□ -1.26
CDHR3-201ENST00000317716 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.18□□□□□ -1.26
CDHR3-201ENST00000317716 TLR9Q9NR96 1032 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 FBXL12Q9NXK8 326 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 AHSPQ9NZD4 102 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 CNIH4Q9P003 139 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 TNFRSF10DQ9UBN6 386 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 KCNN3Q9UGI6 736 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 FBXW2Q9UKT8 454 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 C2orf78A6NCI8 922 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 RFXAPO00287 272 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 DSCR3O14972 297 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 RPP14O95059 124 aaKnown RBP7.18□□□□□ -1.26
CDHR3-201ENST00000317716 RAB36O95755 333 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 ECDO95905 644 aaPredicted RBP7.18□□□□□ -1.26
CDHR3-201ENST00000317716 MT-ND4P03905 459 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 HLA-DPB1P04440 258 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 URODP06132 367 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 PCMT1P22061 227 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 STAT5AP42229 794 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 SRP9P49458 86 aaKnown RBP7.18□□□□□ -1.26
CDHR3-201ENST00000317716 PSMA6P60900 246 aaKnown RBP7.18□□□□□ -1.26
CDHR3-201ENST00000317716 ERVK-25P63136 954 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 LASP1Q14847 261 aaKnown RBP7.18□□□□□ -1.26
CDHR3-201ENST00000317716 C4orf46Q504U0 113 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 KLHL22Q53GT1 634 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 KDM4DQ6B0I6 523 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 FCRLBQ6BAA4 426 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 SLC30A6Q6NXT4 461 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 ZCCHC12Q6PEW1 402 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 UMODL1-AS1Q8N2C9 162 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 FAM98AQ8NCA5 519 aaKnown RBP7.18□□□□□ -1.26
CDHR3-201ENST00000317716 OR4F15Q8NGB8 312 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 NKD1Q969G9 470 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 CMTM7Q96FZ5 175 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 MTIF3Q9H2K0 278 aaKnown RBP7.18□□□□□ -1.26
CDHR3-201ENST00000317716 OR51I1Q9H343 314 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 HPF1Q9NWY4 346 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 REV1Q9UBZ9 1251 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 SLC23A1Q9UHI7 598 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 EDARQ9UNE0 448 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 Q9Y3F1 56 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 HSPE1-MOB4S4R3N1 261 aa7.18□□□□□ -1.26
CDHR3-201ENST00000317716 LGALS8O00214 317 aa7.17□□□□□ -1.26
CDHR3-201ENST00000317716 CAPN5O15484 640 aaPredicted RBP7.17□□□□□ -1.26
CDHR3-201ENST00000317716 RASGRP1O95267 797 aa7.17□□□□□ -1.26
CDHR3-201ENST00000317716 GASTP01350 101 aa7.17□□□□□ -1.26
CDHR3-201ENST00000317716 KCNE1P15382 129 aa7.17□□□□□ -1.26
CDHR3-201ENST00000317716 DDOSTP39656 456 aa7.17□□□□□ -1.26
CDHR3-201ENST00000317716 NSG1P42857 185 aa7.17□□□□□ -1.26
CDHR3-201ENST00000317716 GPR4P46093 362 aa7.17□□□□□ -1.26
CDHR3-201ENST00000317716 SMIM11AP58511 58 aa7.17□□□□□ -1.26
CDHR3-201ENST00000317716 KIAA1024LP59773 190 aa7.17□□□□□ -1.26
CDHR3-201ENST00000317716 CXCR4P61073 352 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms