RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 CADM2Q8N3J6 435 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 ARL14Q8N4G2 192 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 ZSCAN1Q8NBB4 408 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 OR10R2Q8NGX6 335 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 STT3BQ8TCJ2 826 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 UPF1Q92900 1129 aaKnown RBP eCLIP4.33□□□□□ -1.727e-7■□□□□ 10.3
CNOT1-201ENST00000317147 TAAR8Q969N4 342 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 HS6ST2Q96MM7 605 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 SCPEP1Q9HB40 452 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 ASH2LQ9UBL3 628 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 HRH3Q9Y5N1 445 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.33□□□□□ -1.72
CNOT1-201ENST00000317147 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.33□□□□□ -1.72
CNOT1-201ENST00000317147 A0A1W2PQL4 384 aaPredicted RBP4.33□□□□□ -1.72
CNOT1-201ENST00000317147 OIP5O43482 229 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 AQP8O94778 261 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 SERPIND1P05546 499 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 HPGDP15428 266 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 MZF1P28698 734 aaPredicted RBP4.33□□□□□ -1.72
CNOT1-201ENST00000317147 HCCSP53701 268 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 SCARB2Q14108 478 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 ARHGAP11AQ6P4F7 1023 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 C15orf39Q6ZRI6 1047 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 CEP68Q76N32 757 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 BEST3Q8N1M1 668 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 CRYBG2Q8N1P7 616 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 ARL6IP6Q8N6S5 226 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 YIPF7Q8N8F6 280 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 SPATA22Q8NHS9 363 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 FANK1Q8TC84 345 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 EDEM1Q92611 657 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 WACQ9BTA9 647 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 BHLHE41Q9C0J9 482 aaPredicted RBP4.33□□□□□ -1.72
CNOT1-201ENST00000317147 SLC32A1Q9H598 525 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 ZFP14Q9HCL3 533 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 THSD1Q9NS62 852 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 VPS29Q9UBQ0 182 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 CD300AQ9UGN4 299 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 MAFBQ9Y5Q3 323 aaPredicted RBP4.33□□□□□ -1.72
CNOT1-201ENST00000317147 TRDV1A0A1B0GX56 115 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 SLC12A8A0AV02 714 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 BTBD17A6NE02 478 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 METTL15A6NJ78 407 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 TMEM200CA6NKL6 621 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 TAAR5O14804 337 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 MYCLP1P12525 358 aaPredicted RBP4.33□□□□□ -1.72
CNOT1-201ENST00000317147 SRPXP78539 464 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 BCL2L1Q07817 233 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 PPIGQ13427 754 aaKnown RBP eCLIP4.33□□□□□ -1.728e-7■■□□□ 12.5
CNOT1-201ENST00000317147 SERINC3Q13530 473 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 GGTA1PQ4G0N0 100 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 RNLSQ5VYX0 342 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 GSG1LQ6UXU4 331 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 USP51Q70EK9 711 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 LARP4Q71RC2 724 aaKnown RBP eCLIP4.33□□□□□ -1.72
CNOT1-201ENST00000317147 LINGO2Q7L985 606 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 GHDCQ8N2G8 530 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 LIX1Q8N485 282 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 UXS1Q8NBZ7 420 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 NETO2Q8NC67 525 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 NSMAFQ92636 917 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 TMEM125Q96AQ2 219 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 CDK15Q96Q40 435 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 SPNS1Q9H2V7 528 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 ASAH2Q9NR71 780 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 FBXW11Q9UKB1 542 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 U3KQV3 271 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 CXorf49A8MYA2 514 aaPredicted RBP4.33□□□□□ -1.72
CNOT1-201ENST00000317147 NPIPA7E9PJI5 369 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 M0R036 132 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 SOCS5O75159 536 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 CLIC3O95833 236 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 GNRH1P01148 92 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 ANXA4P09525 319 aaPredicted RBP4.33□□□□□ -1.72
CNOT1-201ENST00000317147 NPIPA8P0DM63 369 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 TSPAN8P19075 237 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 GABRB3P28472 473 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 GTF2E2P29084 291 aaKnown RBP4.33□□□□□ -1.72
CNOT1-201ENST00000317147 SPAM1P38567 509 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 CLCN3P51790 818 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 EPHA5P54756 1037 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 GDF10P55107 478 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 MANFP55145 182 aaKnown RBP4.33□□□□□ -1.72
CNOT1-201ENST00000317147 CTBP1Q13363 440 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 DSC3Q14574 896 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 UBXN2BQ14CS0 331 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 LRIT3Q3SXY7 679 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 AKR1C8PQ5T2L2 129 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 TMEM198Q66K66 360 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 GALNT5Q7Z7M9 940 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 C14orf80Q86SX3 495 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 FAM20CQ8IXL6 584 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 SUN3Q8TAQ9 357 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 SHKBP1Q8TBC3 707 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 PYCR2Q96C36 320 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 RNF31Q96EP0 1072 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 ZC3HAV1LQ96H79 300 aaKnown RBP4.33□□□□□ -1.72
CNOT1-201ENST00000317147 FCRL4Q96PJ5 515 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 GABARAPL3Q9BY60 117 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 SYT4Q9H2B2 425 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms