RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 ATXN7L3Q14CW9 347 aaPredicted RBP17.76■□□□□ 0.43
UBXN2A-201ENST00000309033 C10orf62Q5T681 223 aaPredicted RBP17.76■□□□□ 0.43
UBXN2A-201ENST00000309033 C16orf78Q8WTQ4 265 aa17.76■□□□□ 0.43
UBXN2A-201ENST00000309033 LRRN3Q9H3W5 708 aa17.76■□□□□ 0.43
UBXN2A-201ENST00000309033 MYH6P13533 1939 aa17.76■□□□□ 0.43
UBXN2A-201ENST00000309033 NR2C1P13056 603 aa17.76■□□□□ 0.43
UBXN2A-201ENST00000309033 FOXA1P55317 472 aa17.76■□□□□ 0.43
UBXN2A-201ENST00000309033 SGCAQ16586 387 aa17.76■□□□□ 0.43
UBXN2A-201ENST00000309033 RAB12Q6IQ22 244 aa17.76■□□□□ 0.43
UBXN2A-201ENST00000309033 ZNF420Q8TAQ5 688 aaPredicted RBP17.76■□□□□ 0.43
UBXN2A-201ENST00000309033 ALG5Q9Y673 324 aa17.76■□□□□ 0.43
UBXN2A-201ENST00000309033 GMEB1Q9Y692 573 aa17.76■□□□□ 0.43
UBXN2A-201ENST00000309033 SRCP12931 536 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 FXYD6P3P58550 94 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 RPS15AP62244 130 aaKnown RBP17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 KLBQ86Z14 1044 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 OR56A3Q8NH54 315 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 LINC00597Q9H2U6 94 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 SMURF1Q9HCE7 757 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 PLCL2Q9UPR0 1127 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 DISC1C4P0D8 188 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 JMJD7P0C870 316 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 CYBAP13498 195 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 RHCEP18577 417 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 LHCGRP22888 699 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 RAB15P59190 212 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 PIGGQ5H8A4 983 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 GALNT11Q8NCW6 608 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 NETO1Q8TDF5 533 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 TMEM125Q96AQ2 219 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 GPR83Q9NYM4 423 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 M0QZQ0 153 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 HMGB3O15347 200 aaKnown RBP17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 CLEC3AO75596 197 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 ZNF551Q7Z340 670 aaPredicted RBP17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 FAM46AQ96IP4 442 aaKnown RBP17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 TXLNGYQ9BZA5 131 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 NRXN3Q9Y4C0 1643 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 SLC19A2O60779 497 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 ADRB3P13945 408 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 STT3AP46977 705 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 IST1P53990 364 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 LETMD1Q6P1Q0 360 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 USP53Q70EK8 1073 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 SLC44A3Q8N4M1 653 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 MARVELD2Q8N4S9 558 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 FCAMRQ8WWV6 532 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 RTP4Q96DX8 246 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 TREM1Q9NP99 234 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 APOBEC3BQ9UH17 382 aaKnown RBP17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 IL20RAQ9UHF4 553 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 MAGEA12P43365 314 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 RUNX3Q13761 415 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 HSD17B12Q53GQ0 312 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 RNF111Q6ZNA4 994 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 FIBINQ8TAL6 211 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 LRR1Q96L50 414 aa17.75■□□□□ 0.43
UBXN2A-201ENST00000309033 NPIPB15A6NHN6 443 aaPredicted RBP17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 NME4O00746 187 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 CIDECQ96AQ7 238 aaPredicted RBP17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 PEX11GQ96HA9 241 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 FKBP14Q9NWM8 211 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 KDM3BQ7LBC6 1761 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 KIAA0513O60268 411 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 SLC16A8O95907 504 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 IL1RNP18510 177 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 RANBP10Q6VN20 620 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 RFT1Q96AA3 541 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 ZNF350Q9GZX5 532 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 MMP27Q9H306 513 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 PDE7BQ9NP56 450 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 NAV1Q8NEY1 1877 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 H2BFMP0C1H6 154 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 ADORA3P0DMS8 318 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 S1PR1P21453 382 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 SHC2P98077 582 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 E2F1Q01094 437 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 OGFRL1Q5TC84 451 aaPredicted RBP17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 HACD2Q6Y1H2 254 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 SHFQ7M4L6 423 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 TMEM19Q96HH6 336 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 MLXQ9UH92 298 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 MAGEA8P43361 318 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 PCDHGA7Q9Y5G6 932 aa17.74■□□□□ 0.43
UBXN2A-201ENST00000309033 NARSO43776 548 aaKnown RBP17.73■□□□□ 0.43
UBXN2A-201ENST00000309033 PORP16435 677 aaPredicted RBP17.73■□□□□ 0.43
UBXN2A-201ENST00000309033 EIF5AP63241 154 aaKnown RBP17.73■□□□□ 0.43
UBXN2A-201ENST00000309033 CLCA4Q14CN2 919 aa17.73■□□□□ 0.43
UBXN2A-201ENST00000309033 DEFB110Q30KQ9 67 aa17.73■□□□□ 0.43
UBXN2A-201ENST00000309033 UGT3A2Q3SY77 523 aa17.73■□□□□ 0.43
UBXN2A-201ENST00000309033 KLHDC8AQ8IYD2 350 aa17.73■□□□□ 0.43
UBXN2A-201ENST00000309033 ARFGAP1Q8N6T3 406 aa17.73■□□□□ 0.43
UBXN2A-201ENST00000309033 MDGA1Q8NFP4 955 aa17.73■□□□□ 0.43
UBXN2A-201ENST00000309033 ATG5Q9H1Y0 275 aa17.73■□□□□ 0.43
UBXN2A-201ENST00000309033 PCDHGB6Q9Y5F9 930 aa17.73■□□□□ 0.43
UBXN2A-201ENST00000309033 LATS1O95835 1130 aa17.73■□□□□ 0.43
UBXN2A-201ENST00000309033 EPCAMP16422 314 aa17.73■□□□□ 0.43
UBXN2A-201ENST00000309033 HRH2P25021 359 aa17.73■□□□□ 0.43
UBXN2A-201ENST00000309033 GSCP56915 257 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms