RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 FBXL12Q9NXK8 326 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 CRNNQ9UBG3 495 aaPredicted RBP14.34□□□□□ -0.11
CSDC2-201ENST00000306149 ICKQ9UPZ9 632 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 TRPM6Q9BX84 2022 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 M0R3H8 397 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 AGRPO00253 132 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 LATO43561 262 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 SLC28A2O43868 658 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 OR12D1P0DN82 309 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 S100A1P23297 94 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 VEGFBP49765 207 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 TARDBPQ13148 414 aaKnown RBP eCLIP14.34□□□□□ -0.11
CSDC2-201ENST00000306149 SLX4IPQ5VYV7 408 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 IKBIPQ70UQ0 350 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 ADCK2Q7Z695 626 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 FLCNQ8NFG4 579 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 SLC7A13Q8TCU3 470 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 SETD7Q8WTS6 366 aaKnown RBP14.34□□□□□ -0.11
CSDC2-201ENST00000306149 POF1BQ8WVV4 589 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 TRMT61AQ96FX7 289 aaKnown RBP14.34□□□□□ -0.11
CSDC2-201ENST00000306149 TPK1Q9H3S4 243 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 DPEP2Q9H4A9 486 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 C3orf14Q9HBI5 128 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 HHATLQ9HCP6 504 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 SEMA3GQ9NS98 782 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 SIRT3Q9NTG7 399 aaPredicted RBP14.34□□□□□ -0.11
CSDC2-201ENST00000306149 AHSPQ9NZD4 102 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 ATG2BQ96BY7 2078 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 DSPPQ9NZW4 1301 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 RFXAPO00287 272 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 RGS5O15539 181 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 OSMP13725 252 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 ZNF24P17028 368 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 CD72P21854 359 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 ITGB7P26010 798 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 PRKAG1P54619 331 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 AGAP6Q5VW22 663 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 LCTLQ6UWM7 567 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 C11orf74Q86VG3 221 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 AMZ2Q86W34 360 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 CELF2-AS1Q8N7Q2 184 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 OR5P2Q8WZ92 322 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 ZNF486Q96H40 463 aaPredicted RBP14.34□□□□□ -0.11
CSDC2-201ENST00000306149 AGAP4Q96P64 663 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 SLC30A2Q9BRI3 323 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 MS4A8Q9BY19 250 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 POLR2J3Q9H1A7 115 aaKnown RBP14.34□□□□□ -0.11
CSDC2-201ENST00000306149 CXXC1Q9P0U4 656 aaPredicted RBP14.34□□□□□ -0.11
CSDC2-201ENST00000306149 SEC14L3Q9UDX4 400 aa14.34□□□□□ -0.11
CSDC2-201ENST00000306149 OR1F1O43749 312 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 LCMT2O60294 686 aaKnown RBP14.33□□□□□ -0.12
CSDC2-201ENST00000306149 APOL3O95236 402 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 TIMP1P01033 207 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 PCCBP05166 539 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 KELP23276 732 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 BMPR1AP36894 532 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 RPS19P39019 145 aaKnown RBP14.33□□□□□ -0.12
CSDC2-201ENST00000306149 CCT3P49368 545 aaKnown RBP14.33□□□□□ -0.12
CSDC2-201ENST00000306149 XKP51811 444 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 PRMT2P55345 433 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 SF3B4Q15427 424 aaKnown RBP eCLIP14.33□□□□□ -0.12
CSDC2-201ENST00000306149 PDZD3Q86UT5 571 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 HCAR2Q8TDS4 363 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 OR8D1Q8WZ84 308 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 SMURF1Q9HCE7 757 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 FZD3Q9NPG1 666 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 TVP23BQ9NYZ1 205 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 TRPC4Q9UBN4 977 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 MRPS23Q9Y3D9 190 aaKnown RBP14.33□□□□□ -0.12
CSDC2-201ENST00000306149 PTPRSQ13332 1948 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 C17orf113A0A1B0GUU1 675 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 PDZK1P1A8MUH7 402 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 RGS13O14921 159 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 H1F0P07305 194 aaKnown RBP14.33□□□□□ -0.12
CSDC2-201ENST00000306149 ENDOUP21128 410 aaKnown RBP14.33□□□□□ -0.12
CSDC2-201ENST00000306149 CTNNB1P35222 781 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 TIE1P35590 1138 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 IFITM2Q01629 132 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 RHAGQ02094 409 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 HEPACAMQ14CZ8 416 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 SETD6Q8TBK2 473 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 SMPDL3AQ92484 453 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 LINC00615Q96LM1 132 aaPredicted RBP14.33□□□□□ -0.12
CSDC2-201ENST00000306149 SLC6A18Q96N87 628 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 TREX2Q9BQ50 279 aaPredicted RBP14.33□□□□□ -0.12
CSDC2-201ENST00000306149 PRR14Q9BWN1 585 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 ASPNQ9BXN1 380 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 RACGAP1Q9H0H5 632 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 SLC25A19Q9HC21 320 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 A4GALTQ9NPC4 353 aa14.33□□□□□ -0.12
CSDC2-201ENST00000306149 LSM2Q9Y333 95 aaKnown RBP14.33□□□□□ -0.12
CSDC2-201ENST00000306149 LINC00854A0A1B0GVQ3 168 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 CAPN5O15484 640 aaPredicted RBP14.32□□□□□ -0.12
CSDC2-201ENST00000306149 CSO75390 466 aaKnown RBP14.32□□□□□ -0.12
CSDC2-201ENST00000306149 NME6O75414 186 aaPredicted RBP14.32□□□□□ -0.12
CSDC2-201ENST00000306149 ADAP00813 363 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 SCG5P05408 212 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 MXD1Q05195 221 aa14.32□□□□□ -0.12
CSDC2-201ENST00000306149 HNRNPA1L2Q32P51 320 aaKnown RBP14.32□□□□□ -0.12
CSDC2-201ENST00000306149 PGBD2Q6P3X8 592 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms