RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 SARDHQ9UL12 918 aa9.97□□□□□ -0.81
CLIP1-201ENST00000302528 PEAK1Q9H792 1746 aa9.97□□□□□ -0.81
CLIP1-201ENST00000302528 SEC14L5O43304 696 aa9.97□□□□□ -0.81
CLIP1-201ENST00000302528 UCHL1P09936 223 aa9.97□□□□□ -0.81
CLIP1-201ENST00000302528 TMEM225BP0DP42 221 aa9.97□□□□□ -0.81
CLIP1-201ENST00000302528 CKMT1AP12532 417 aa9.97□□□□□ -0.81
CLIP1-201ENST00000302528 ART1P52961 327 aa9.97□□□□□ -0.81
CLIP1-201ENST00000302528 VSX2P58304 361 aaPredicted RBP9.97□□□□□ -0.81
CLIP1-201ENST00000302528 FKBP1BP68106 108 aa9.97□□□□□ -0.81
CLIP1-201ENST00000302528 ESCO2Q56NI9 601 aa9.97□□□□□ -0.81
CLIP1-201ENST00000302528 SIRPB2Q5JXA9 342 aa9.97□□□□□ -0.81
CLIP1-201ENST00000302528 TPGS2Q68CL5 300 aa9.97□□□□□ -0.81
CLIP1-201ENST00000302528 PRR18Q8N4B5 295 aa9.97□□□□□ -0.81
CLIP1-201ENST00000302528 KLHDC7BQ96G42 594 aa9.97□□□□□ -0.81
CLIP1-201ENST00000302528 FAM163AQ96GL9 167 aaPredicted RBP9.97□□□□□ -0.81
CLIP1-201ENST00000302528 TMEM74Q96NL1 305 aa9.97□□□□□ -0.81
CLIP1-201ENST00000302528 PKP2Q99959 881 aa9.97□□□□□ -0.81
CLIP1-201ENST00000302528 FAM124BQ9H5Z6 455 aaPredicted RBP9.97□□□□□ -0.81
CLIP1-201ENST00000302528 ASF1BQ9NVP2 202 aa9.97□□□□□ -0.81
CLIP1-201ENST00000302528 ACSL6Q9UKU0 697 aa9.97□□□□□ -0.81
CLIP1-201ENST00000302528 ACRP10323 421 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 C6P13671 934 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 ZNF30P17039 623 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 PYCR1P32322 319 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 ACVR1BP36896 505 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 PBX1P40424 430 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 GDF5P43026 501 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 RNF144AP50876 292 aaPredicted RBP9.96□□□□□ -0.81
CLIP1-201ENST00000302528 KCNC4Q03721 635 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 RAB11BQ15907 218 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 PTCHD3Q3KNS1 767 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 ELP2Q6IA86 826 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 SMIM15Q7Z3B0 74 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 C6orf120Q7Z4R8 191 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 VGLL2Q8N8G2 317 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 BBS1Q8NFJ9 593 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 OR1S1Q8NH92 325 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 PELOQ9BRX2 385 aaKnown RBP9.96□□□□□ -0.81
CLIP1-201ENST00000302528 POLE4Q9NR33 117 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 TMEM9Q9P0T7 183 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 RABL2AQ9UBK7 228 aaPredicted RBP9.96□□□□□ -0.81
CLIP1-201ENST00000302528 RABL2BQ9UNT1 228 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 TTC24A2A3L6 582 aaPredicted RBP9.96□□□□□ -0.81
CLIP1-201ENST00000302528 OR6C74A6NCV1 312 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 A6NHS1 94 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 DFNA5O60443 496 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 LYPLA2O95372 231 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 AMY2AP04746 511 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 UQCRC2P22695 453 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 RORAP35398 523 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 GPR143P51810 404 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 GDF10P55107 478 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 SPANXN4Q5MJ08 99 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 CELF5Q8N6W0 485 aaKnown RBP9.96□□□□□ -0.81
CLIP1-201ENST00000302528 ZDHHC1Q8WTX9 485 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 SAT2Q96F10 170 aaPredicted RBP9.96□□□□□ -0.81
CLIP1-201ENST00000302528 CNTNAP3BQ96NU0 1288 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 FAM83CQ9BQN1 747 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 PPIL3Q9H2H8 161 aaKnown RBP9.96□□□□□ -0.81
CLIP1-201ENST00000302528 CDH20Q9HBT6 801 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 HRASLS2Q9NWW9 162 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 SH3BGRL2Q9UJC5 107 aa9.96□□□□□ -0.81
CLIP1-201ENST00000302528 ZNF860A6NHJ4 632 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 CYB5BO43169 146 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 CLDN7O95471 211 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 AQP2P41181 271 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 KCNC1P48547 511 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 FXYD4P59646 89 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 ACTA2P62736 377 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 ACTG2P63267 376 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 POU4F2Q12837 409 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 ADGRF1Q5T601 910 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 AWAT2Q6E213 333 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 SUSD1Q6UWL2 747 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 CYP4V2Q6ZWL3 525 aaPredicted RBP9.96□□□□□ -0.82
CLIP1-201ENST00000302528 ERMP1Q7Z2K6 904 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 CMTM1Q8IZ96 169 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 OR9A1PQ8NGU1 263 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 NANOS1Q8WY41 292 aaKnown RBP9.96□□□□□ -0.82
CLIP1-201ENST00000302528 LRCH3Q96II8 777 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 ABCG5Q9H222 651 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 HSD3B7Q9H2F3 369 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 CD8B2A6NJW9 211 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 ITM2AO43736 263 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 AOC2O75106 756 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 STK17BO94768 372 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 GALTP07902 379 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 EBLN1P0CF75 366 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 CD8BP10966 210 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 FBLP22087 321 aaKnown RBP9.96□□□□□ -0.82
CLIP1-201ENST00000302528 LMO2P25791 158 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 HNF1BP35680 557 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 TAS2R20P59543 309 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 ZNF763Q0D2J5 394 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 FAM110CQ1W6H9 321 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 MYLK3Q32MK0 819 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 BCL2L15Q5TBC7 163 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 NLGN4XQ8N0W4 816 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 SCAMP5Q8TAC9 235 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 FUBP3Q96I24 572 aaKnown RBP eCLIP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms