RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 HRH3Q9Y5N1 445 aa10.42□□□□□ -0.74
CLCC1-201ENST00000302500 PHF3Q92576 2039 aaKnown RBP10.42□□□□□ -0.74
CLCC1-201ENST00000302500 TYROBPO43914 113 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 SUPT7LO94864 414 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 ATP1B1P05026 303 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 KLK1P06870 262 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 GP1BBP13224 206 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 KRT4P19013 534 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 PRPH2P23942 346 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 CA7P43166 264 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 ETV4P43268 484 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 RAP1GDS1P52306 607 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 PKNOX1P55347 436 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 STX4Q12846 297 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 HYAL4Q2M3T9 481 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 PRICKLE4Q2TBC4 344 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 UGT3A2Q3SY77 523 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 CMPK2Q5EBM0 449 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 OR52E8Q6IFG1 317 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 HSDL2Q6YN16 418 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 GPRIN3Q6ZVF9 776 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.41□□□□□ -0.74
CLCC1-201ENST00000302500 GPALPP1Q8IXQ4 340 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 C1orf52Q8N6N3 182 aaKnown RBP10.41□□□□□ -0.74
CLCC1-201ENST00000302500 SUN3Q8TAQ9 357 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 PRR7Q8TB68 274 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 RDH11Q8TC12 318 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 UBLCP1Q8WVY7 318 aaPredicted RBP10.41□□□□□ -0.74
CLCC1-201ENST00000302500 CNRIP1Q96F85 164 aaPredicted RBP10.41□□□□□ -0.74
CLCC1-201ENST00000302500 APIPQ96GX9 242 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 OR8D2Q9GZM6 311 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 TUBB1Q9H4B7 451 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 ZDHHC11Q9H8X9 412 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 DTX4Q9Y2E6 619 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 PLLPQ9Y342 182 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 TIMM22Q9Y584 194 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 CLCA3PQ9Y6N3 262 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 TACC2O95359 2948 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 ABCA12Q86UK0 2595 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 PDZD2O15018 2839 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 NOTCH2Q04721 2471 aa10.41□□□□□ -0.74
CLCC1-201ENST00000302500 MLYCDO95822 493 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 CRYABP02511 175 aaKnown RBP10.4□□□□□ -0.74
CLCC1-201ENST00000302500 ENO1P06733 434 aaKnown RBP10.4□□□□□ -0.74
CLCC1-201ENST00000302500 CPMP14384 443 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 CD46P15529 392 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 TAC1P20366 129 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 BUD31P41223 144 aaPredicted RBP10.4□□□□□ -0.74
CLCC1-201ENST00000302500 NAGLUP54802 743 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 TRA2BP62995 288 aaKnown RBP10.4□□□□□ -0.74
CLCC1-201ENST00000302500 PHEXP78562 749 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 PLIN5Q00G26 463 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 IFT88Q13099 833 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 CCDC153Q494R4 210 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 HIST2H2BCQ6DN03 193 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 EMBQ6PCB8 327 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 C4orf33Q8N1A6 199 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 CYP4Z2PQ8N1L4 340 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 RIBC1Q8N443 379 aaPredicted RBP10.4□□□□□ -0.74
CLCC1-201ENST00000302500 GOLM1Q8NBJ4 401 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 TMEM178AQ8NBL3 297 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 PSD4Q8NDX1 1056 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 C7orf57Q8NEG2 295 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 DOK4Q8TEW6 326 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 RNF138Q8WVD3 245 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 SELENOMQ8WWX9 145 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 WWTR1Q9GZV5 400 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 ELOVL6Q9H5J4 265 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 MAT2BQ9NZL9 334 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 VPS29Q9UBQ0 182 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 MCM8Q9UJA3 840 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 GRID1Q9ULK0 1009 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 SNX6Q9UNH7 406 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 SLC12A4Q9UP95 1085 aa10.4□□□□□ -0.74
CLCC1-201ENST00000302500 CHCHD2Q9Y6H1 151 aaPredicted RBP10.4□□□□□ -0.74
CLCC1-201ENST00000302500 ARHGAP10A1A4S6 786 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 C1orf226A1L170 272 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 B4DXG7 233 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 WWP2O00308 870 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 FCHO1O14526 889 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 ZNHIT1O43257 154 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 LRRTM2O43300 516 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 AGFG2O95081 481 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 UNC5CO95185 931 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 SLU7O95391 586 aaKnown RBP10.39□□□□□ -0.75
CLCC1-201ENST00000302500 CBX7O95931 251 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 IFNA16P05015 189 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 FBXO45P0C2W1 286 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 CCL3P10147 92 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 SSTR4P31391 388 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 SSR4P51571 173 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 ERVK-8P63133 956 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 ADORA2A-AS1P86434 159 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 HMGCS1Q01581 520 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 MAP4K2Q12851 820 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 CDSNQ15517 529 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 ERCC6LQ2NKX8 1250 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 SGO1Q5FBB7 561 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 EMC4Q5J8M3 183 aa10.39□□□□□ -0.75
CLCC1-201ENST00000302500 FNDC7Q5VTL7 733 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms