RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 KIF18BQ86Y91 864 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 DPCDQ9BVM2 203 aaPredicted RBP10.34□□□□□ -0.75
ZNF558-201ENST00000301475 CDCP1Q9H5V8 836 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 SLC30A4O14863 429 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 BET1O15155 118 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 CLDN11O75508 207 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 LALBAP00709 142 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 SYPP08247 313 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 OR12D1P0DN82 309 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 GLULP15104 373 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 SDHBP21912 280 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 SSTR2P30874 369 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 BMP8BP34820 402 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 BTCP35070 178 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 EPHA5P54756 1037 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 WDR5P61964 334 aaKnown RBP10.33□□□□□ -0.75
ZNF558-201ENST00000301475 DOC2AQ14183 400 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 OCLNQ16625 522 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 MPEG1Q2M385 716 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 PLA1AQ53H76 456 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 XKR6Q5GH73 641 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 METAP1DQ6UB28 335 aaPredicted RBP10.33□□□□□ -0.75
ZNF558-201ENST00000301475 OTOP2Q7RTS6 562 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 BMP8AQ7Z5Y6 402 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 ZNF280BQ86YH2 543 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 ASB11Q8WXH4 323 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 SORCS2Q96PQ0 1159 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 WRAP53Q9BUR4 548 aaKnown RBP10.33□□□□□ -0.75
ZNF558-201ENST00000301475 MED28Q9H204 178 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 ZNF222Q9UK12 451 aa10.33□□□□□ -0.75
ZNF558-201ENST00000301475 DOCK6Q96HP0 2047 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.33□□□□□ -0.76
ZNF558-201ENST00000301475 GNG14A0A1W2PPG7 69 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 MGAT4DA6NG13 374 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 PRRG1O14668 218 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 TPPPO94811 219 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 SOD1P00441 154 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 KLKB1P03952 638 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 GBAP04062 536 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 HOXD4P09016 255 aaPredicted RBP10.33□□□□□ -0.76
ZNF558-201ENST00000301475 RHOAP61586 193 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 MC1RQ01726 317 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 RPA4Q13156 261 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 ZNF177Q13360 481 aaPredicted RBP10.33□□□□□ -0.76
ZNF558-201ENST00000301475 TPBGQ13641 420 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 UAP1L1Q3KQV9 507 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 RPS26P11Q5JNZ5 115 aaPredicted RBP10.33□□□□□ -0.76
ZNF558-201ENST00000301475 TYW3Q6IPR3 259 aaKnown RBP10.33□□□□□ -0.76
ZNF558-201ENST00000301475 B3GLCTQ6Y288 498 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 TMEM91Q6ZNR0 172 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 SHFQ7M4L6 423 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 C16orf62Q7Z3J2 963 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 PRSS42Q7Z5A4 293 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 TSPAN33Q86UF1 283 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 SDR16C5Q8N3Y7 309 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 IL17RCQ8NAC3 791 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 PLA2G15Q8NCC3 412 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 LRR1Q96L50 414 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 WFDC6Q9BQY6 131 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 RNF32Q9H0A6 362 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 GHITMQ9H3K2 345 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 FOLH1BQ9HBA9 442 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 ZSCAN32Q9NX65 697 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 ING4Q9UNL4 249 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 SLC45A1Q9Y2W3 748 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 TRAV6A0A075B6T7 132 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 K7ERQ8 282 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 RFXAPO00287 272 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 DVL2O14641 736 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 ZNF623O75123 536 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 OAZ2O95190 189 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 CFDP00746 253 aaPredicted RBP10.33□□□□□ -0.76
ZNF558-201ENST00000301475 HIST1H2AGP0C0S8 130 aaPredicted RBP10.33□□□□□ -0.76
ZNF558-201ENST00000301475 CBSLP0DN79 551 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 ARAFP10398 606 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 ZNF8P17098 575 aaPredicted RBP10.33□□□□□ -0.76
ZNF558-201ENST00000301475 HIST1H2ADP20671 130 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 CBSP35520 551 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 ASMTP46597 345 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 PTPN5P54829 565 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 BTG1P62324 171 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 DSC1Q08554 894 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 KCNC3Q14003 757 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 GRK1Q15835 563 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 CDKN3Q16667 212 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 PGBD2Q6P3X8 592 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 CD200R1LQ6Q8B3 271 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 ASB18Q6ZVZ8 466 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 IFNL1Q8IU54 200 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 RBM45Q8IUH3 476 aaKnown RBP10.33□□□□□ -0.76
ZNF558-201ENST00000301475 GPALPP1Q8IXQ4 340 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 GOT1L1Q8NHS2 421 aaPredicted RBP10.33□□□□□ -0.76
ZNF558-201ENST00000301475 HIST1H2AHQ96KK5 128 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 RBP7Q96R05 134 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 HIST1H2AJQ99878 128 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 H2AFJQ9BTM1 129 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 C1QTNF6Q9BXI9 259 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 POLR2J3Q9H1A7 115 aaKnown RBP10.33□□□□□ -0.76
ZNF558-201ENST00000301475 PADI3Q9ULW8 664 aa10.33□□□□□ -0.76
ZNF558-201ENST00000301475 C7orf66A4D0T2 115 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms