RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 C3orf14Q9HBI5 128 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 NEUROD4Q9HD90 331 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 CRNNQ9UBG3 495 aaPredicted RBP12.27□□□□□ -0.45
C9orf3-201ENST00000277198 MGAT4BQ9UQ53 548 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 GVINP1Q7Z2Y8 2422 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 K7ESF4 209 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 TBX1O43435 398 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 KLK1P06870 262 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 OSMP13725 252 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 NUDT6P53370 316 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 SMIM11AP58511 58 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 MC1RQ01726 317 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 SRSF5Q13243 272 aaKnown RBP12.26□□□□□ -0.45
C9orf3-201ENST00000277198 LRRC32Q14392 662 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 MAPK11Q15759 364 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 SPANXN2Q5MJ10 180 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 TMEM201Q5SNT2 666 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 KLHL17Q6TDP4 642 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 TMIGD1Q6UXZ0 262 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 TRIM69Q86WT6 500 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 KRT73Q86Y46 540 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 WFIKKN2Q8TEU8 576 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 DHRS1Q96LJ7 313 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 TAPBPLQ9BX59 468 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 OR51E2Q9H255 320 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 SLC25A19Q9HC21 320 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 TRIM39Q9HCM9 518 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 RAB23Q9ULC3 237 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 TMCC3Q9ULS5 477 aa12.26□□□□□ -0.45
C9orf3-201ENST00000277198 LOC100506127A0A0U1RQW1 187 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 K7EQS6 105 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 SLC9A3R1O14745 358 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-201ENST00000277198 GASTP01350 101 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 PRNPP04156 253 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 SCG5P05408 212 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 IL3P08700 152 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 DDCP20711 480 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 ENDOUP21128 410 aaKnown RBP12.25□□□□□ -0.45
C9orf3-201ENST00000277198 CXCR2P25025 360 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 ACADLP28330 430 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 GRK5P34947 590 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 DPTQ07507 201 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 STARD3Q14849 445 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 NCF4Q15080 339 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 SAXO2Q658L1 398 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 DSG4Q86SJ6 1040 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 SLC9B2Q86UD5 537 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 ATCAYQ86WG3 371 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 SPEM1Q8N4L4 309 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 RPLP0P6Q8NHW5 317 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 QRFPRQ96P65 431 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 TEFMQ96QE5 360 aaKnown RBP12.25□□□□□ -0.45
C9orf3-201ENST00000277198 CHCHD6Q9BRQ6 235 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 CENPOQ9BU64 300 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 PITHD1Q9GZP4 211 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-201ENST00000277198 KLHL25Q9H0H3 589 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 RHBGQ9H310 441 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 NMNAT1Q9HAN9 279 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-201ENST00000277198 ACSL6Q9UKU0 697 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 TRAPPC4Q9Y296 219 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 FAM186AA6NE01 2351 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 HTR3EA5X5Y0 456 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 CHURC1-FNTBB4DL54 471 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 C5orf58C9J3I9 102 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 J3KTA2 159 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 VEGFDO43915 354 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 GFRA3O60609 400 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 COQ9O75208 318 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 SOD1P00441 154 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 PBLDP30039 288 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-201ENST00000277198 TIE1P35590 1138 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 SOAT1P35610 550 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 HSD17B2P37059 387 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 CXCL12P48061 93 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 FNTBP49356 437 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 CD300CQ08708 224 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 RPA4Q13156 261 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 SLC13A2Q13183 592 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 ARHGAP19Q14CB8 494 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 HEPACAMQ14CZ8 416 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 BCL2A1Q16548 175 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 CEACAM20Q6UY09 585 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 PARS2Q7L3T8 475 aaKnown RBP12.25□□□□□ -0.45
C9orf3-201ENST00000277198 CCDC190Q86UF4 302 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 FAM129CQ86XR2 697 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 ETFBKMTQ8IXQ9 262 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 OR2L2Q8NH16 312 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 CYB5D2Q8WUJ1 264 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 GTPBP3Q969Y2 492 aaKnown RBP12.25□□□□□ -0.45
C9orf3-201ENST00000277198 RAD51AP1Q96B01 352 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 UCK2Q9BZX2 261 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 NPAP1Q9NZP6 1156 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 TAAR2Q9P1P5 351 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 FBXO4Q9UKT5 387 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 SH2B3Q9UQQ2 575 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 PCDHGB6Q9Y5F9 930 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 OTOGLQ3ZCN5 2332 aa12.25□□□□□ -0.45
C9orf3-201ENST00000277198 NUP214P35658 2090 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-201ENST00000277198 PRR23AA6NEV1 266 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 FAAHO00519 579 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms