RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 SYPL1Q16563 259 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 CTU2Q2VPK5 515 aaKnown RBP9.04□□□□□ -0.96
TRIM55-201ENST00000276573 MANEAQ5SRI9 462 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 LAIR2Q6ISS4 152 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 BHLHB9Q6PI77 547 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 TTC29Q8NA56 475 aaPredicted RBP9.04□□□□□ -0.96
TRIM55-201ENST00000276573 OR4C15Q8NGM1 316 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 APOBEC4Q8WW27 367 aaKnown RBP9.04□□□□□ -0.96
TRIM55-201ENST00000276573 MOAP1Q96BY2 351 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 SHDQ96IW2 340 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 PIP5K1AQ99755 562 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 LRRC61Q9BV99 259 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 FOXQ1Q9C009 403 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 RIBC2Q9H4K1 309 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 C3orf14Q9HBI5 128 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 KRT84Q9NSB2 600 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 EXD2Q9NVH0 621 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 DDX18Q9NVP1 670 aaKnown RBP9.04□□□□□ -0.96
TRIM55-201ENST00000276573 P2RX2Q9UBL9 471 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 PHF11Q9UIL8 331 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 COLQQ9Y215 455 aaPredicted RBP9.04□□□□□ -0.96
TRIM55-201ENST00000276573 CEPT1Q9Y6K0 416 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 ARHGEF17Q96PE2 2063 aaPredicted RBP9.04□□□□□ -0.96
TRIM55-201ENST00000276573 TMEM247A6NEH6 219 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 OR5K3A6NET4 321 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 E9PQ18 207 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 J3KTA2 159 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 BCKDKO14874 412 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 B4GAT1O43505 415 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 B3GALT2O43825 422 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 SLC28A2O43868 658 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 CSF2P04141 144 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 FESP07332 822 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 IL9P15248 144 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 RHCEP18577 417 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 CRHBPP24387 322 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 PTGER1P34995 402 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 BUD31P41223 144 aaPredicted RBP9.04□□□□□ -0.96
TRIM55-201ENST00000276573 KCNJ5P48544 419 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 KHKP50053 298 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 ANXA11P50995 505 aaKnown RBP9.04□□□□□ -0.96
TRIM55-201ENST00000276573 LIM2P55344 173 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 SPIBQ01892 262 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 KCNC4Q03721 635 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 CDK5R2Q13319 367 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 TOP3AQ13472 1001 aaPredicted RBP9.04□□□□□ -0.96
TRIM55-201ENST00000276573 RAPSNQ13702 412 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 MICAQ29983 383 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 DEFB134Q4QY38 66 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 ARMC6Q6NXE6 501 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 RNF44Q7L0R7 432 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 SZRD1Q7Z422 152 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 OOSP2Q86WS3 158 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 ZNF761Q86XN6 746 aaPredicted RBP9.04□□□□□ -0.96
TRIM55-201ENST00000276573 CADM4Q8NFZ8 388 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 GPR32P1Q8NGA4 272 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 OR56A1Q8NGH5 318 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 OR5D16Q8NGK9 328 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 ZCCHC10Q8TBK6 192 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 MIPOL1Q8TD10 442 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 FBLIM1Q8WUP2 373 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 KLHL6Q8WZ60 621 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 RSC1A1Q92681 617 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 RERGQ96A58 199 aaPredicted RBP9.04□□□□□ -0.96
TRIM55-201ENST00000276573 ELP4Q96EB1 424 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 C16orf58Q96GQ5 468 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 ZNF607Q96SK3 696 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 YIPF4Q9BSR8 244 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 PCED1AQ9H1Q7 454 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 ADNPQ9H2P0 1102 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 ACER3Q9NUN7 267 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 KIF17Q9P2E2 1029 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 FAM32AQ9Y421 112 aaKnown RBP9.04□□□□□ -0.96
TRIM55-201ENST00000276573 B4DGG1 531 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 TLR4O00206 839 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 ZSCAN9O15535 394 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 SERPINB7O75635 380 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 IFNW1P05000 195 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 EIF2S1P05198 315 aaKnown RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 HMGN2P05204 90 aaKnown RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 FHP07954 510 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 NR2F1P10589 423 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 ANXA8P13928 327 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 IL7RP16871 459 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 TYRP1P17643 537 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 ALOX12P18054 663 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 ZNF10P21506 573 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-201ENST00000276573 MAOBP27338 520 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 XKP51811 444 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 CDH12P55289 794 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 ESRRGP62508 458 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 TNFRSF17Q02223 184 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 NPRL3Q12980 569 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 KEAP1Q14145 624 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 ZBED5Q49AG3 693 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 TMEM107Q6UX40 140 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 ABHD13Q7L211 337 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 ZNF438Q7Z4V0 828 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 ZNF605Q86T29 641 aa9.03□□□□□ -0.96
TRIM55-201ENST00000276573 GJD3Q8N144 294 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms