RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 ZNF33BQ06732 778 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 RPE65Q16518 533 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 UGT3A2Q3SY77 523 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 KIAA1614Q5VZ46 1190 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 DEFB123Q8N688 67 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 MAL2Q969L2 176 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 ECHDC3Q96DC8 303 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 TMEM19Q96HH6 336 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 SORT1Q99523 831 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 CMKLR1Q99788 373 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 ALOXE3Q9BYJ1 711 aa13.07□□□□□ -0.32
NPC1-201ENST00000269228 UBE2ZQ9H832 354 aaPredicted RBP13.07□□□□□ -0.32
NPC1-201ENST00000269228 A0A1B0GVT2 93 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 HYKKA2RU49 373 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 ARHGEF15O94989 841 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 CLIC3O95833 236 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 CYB5AP00167 134 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 GCAP28676 217 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 PMS2P3Q13401 168 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 GINS1Q14691 196 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 MEP1AQ16819 746 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 TMEM225Q6GV28 225 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 METTL2BQ6P1Q9 378 aaKnown RBP13.06□□□□□ -0.32
NPC1-201ENST00000269228 OR2L5Q8NG80 312 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 LKAAEAR1Q8TD35 194 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 TMEM203Q969S6 136 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 ELSPBP1Q96BH3 223 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 RBP7Q96R05 134 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 INPP5KQ9BT40 448 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.06□□□□□ -0.32
NPC1-201ENST00000269228 RLN1P04808 185 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 NR2C1P13056 603 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 BLMHQ13867 455 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 NR0B2Q15466 257 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 MCATQ8IVS2 390 aaKnown RBP13.06□□□□□ -0.32
NPC1-201ENST00000269228 YIPF7Q8N8F6 280 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 GNPDA2Q8TDQ7 276 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 OSTF1Q92882 214 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 TMCO6Q96DC7 493 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 OMA1Q96E52 524 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 POLDIP3Q9BY77 421 aaKnown RBP13.06□□□□□ -0.32
NPC1-201ENST00000269228 B3GAT2Q9NPZ5 323 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 SDR39U1Q9NRG7 319 aaPredicted RBP13.06□□□□□ -0.32
NPC1-201ENST00000269228 PCDHGB1Q9Y5G3 927 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 COL5A3P25940 1745 aaPredicted RBP13.06□□□□□ -0.32
NPC1-201ENST00000269228 A0A1W2PRG6 482 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 EIF1AYO14602 144 aaKnown RBP13.06□□□□□ -0.32
NPC1-201ENST00000269228 VILLO15195 856 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 HOXC11O43248 304 aaPredicted RBP13.06□□□□□ -0.32
NPC1-201ENST00000269228 YPEL5P62699 121 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 EXOC3L2Q2M3D2 409 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 ADNP2Q6IQ32 1131 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 SLC25A24Q6NUK1 477 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 TMEM151BQ8IW70 566 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 ACOT4Q8N9L9 421 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 C9orf43Q8TAL5 461 aaPredicted RBP13.06□□□□□ -0.32
NPC1-201ENST00000269228 CIDECQ96AQ7 238 aaPredicted RBP13.06□□□□□ -0.32
NPC1-201ENST00000269228 PIP5K1AQ99755 562 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 PDCD10Q9BUL8 212 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 NTMT1Q9BV86 223 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 CUEDC1Q9NWM3 386 aaPredicted RBP13.06□□□□□ -0.32
NPC1-201ENST00000269228 GABBR2O75899 941 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 SDC1P18827 310 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 LRIT3Q3SXY7 679 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 SHQ1Q6PI26 577 aaKnown RBP13.06□□□□□ -0.32
NPC1-201ENST00000269228 LARP4Q71RC2 724 aaKnown RBP eCLIP13.06□□□□□ -0.32
NPC1-201ENST00000269228 TMPRSS9Q7Z410 1059 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 FANK1Q8TC84 345 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 SLC22A8Q8TCC7 542 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 PNPLA2Q96AD5 504 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 MYADMQ96S97 322 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 ACPTQ9BZG2 426 aa13.06□□□□□ -0.32
NPC1-201ENST00000269228 J3QLW9 94 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 ZNF19P17023 458 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 ZNF20P17024 532 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 EDNRAP25101 427 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 SFT2D3Q587I9 215 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 SHISA6Q6ZSJ9 500 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 UTS2BQ765I0 119 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 ZSCAN1Q8NBB4 408 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 PDPRQ8NCN5 879 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 C7orf57Q8NEG2 295 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 CNDP2Q96KP4 475 aaKnown RBP13.05□□□□□ -0.32
NPC1-201ENST00000269228 CRB3Q9BUF7 120 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 PHF7Q9BWX1 381 aaPredicted RBP13.05□□□□□ -0.32
NPC1-201ENST00000269228 HDAC8Q9BY41 377 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 H0YC42 278 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 GPR37L1O60883 481 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 TNFRSF21O75509 655 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 IL33O95760 270 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 AK1P00568 194 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 MAP3K8P41279 467 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 RASGEF1BQ0VAM2 473 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 HACD2Q6Y1H2 254 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 OR52N2Q8NGI0 321 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 DUSP23Q9BVJ7 150 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 CCM2LQ9NUG4 571 aaPredicted RBP13.05□□□□□ -0.32
NPC1-201ENST00000269228 FAM53CQ9NYF3 392 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 COL4A1P02462 1669 aa13.05□□□□□ -0.32
NPC1-201ENST00000269228 H7C0S8 307 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms