RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 TRIP6Q15654 476 aaKnown RBP14.48□□□□□ -0.09
COPS3-201ENST00000268717 PRTGQ2VWP7 1150 aa14.48□□□□□ -0.09
COPS3-201ENST00000268717 DEFB134Q4QY38 66 aa14.48□□□□□ -0.09
COPS3-201ENST00000268717 LRRC23Q53EV4 343 aaPredicted RBP14.48□□□□□ -0.09
COPS3-201ENST00000268717 C18orf63Q68DL7 685 aa14.48□□□□□ -0.09
COPS3-201ENST00000268717 EPHX4Q8IUS5 362 aa14.48□□□□□ -0.09
COPS3-201ENST00000268717 OR5AK3PQ8NH89 298 aa14.48□□□□□ -0.09
COPS3-201ENST00000268717 SUN3Q8TAQ9 357 aa14.48□□□□□ -0.09
COPS3-201ENST00000268717 ZCCHC10Q8TBK6 192 aa14.48□□□□□ -0.09
COPS3-201ENST00000268717 SAP25Q8TEE9 199 aa14.48□□□□□ -0.09
COPS3-201ENST00000268717 ZNF681Q96N22 645 aa14.48□□□□□ -0.09
COPS3-201ENST00000268717 CLK4Q9HAZ1 481 aaKnown RBP14.48□□□□□ -0.09
COPS3-201ENST00000268717 ADPRHL2Q9NX46 363 aa14.48□□□□□ -0.09
COPS3-201ENST00000268717 ANGPT4Q9Y264 503 aa14.48□□□□□ -0.09
COPS3-201ENST00000268717 MAP4K5Q9Y4K4 846 aa14.48□□□□□ -0.09
COPS3-201ENST00000268717 CHD8Q9HCK8 2581 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 CEP295Q9C0D2 2601 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 SLC9B1P1A6NJY1 282 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 ACOX3O15254 700 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 DPM1O60762 260 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 PRAMEF10O60809 474 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 RASAL1O95294 804 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 IFNA14P01570 189 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 GLB1P16278 677 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 CPN2P22792 545 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 GRK6P43250 576 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 CLCN2P51788 898 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 PCBP3P57721 371 aaKnown RBP14.47□□□□□ -0.09
COPS3-201ENST00000268717 VSX2P58304 361 aaPredicted RBP14.47□□□□□ -0.09
COPS3-201ENST00000268717 GPLD1P80108 840 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 CDK6Q00534 326 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 MYBPC3Q14896 1274 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 C16orf72Q14CZ0 275 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 SPDYE7PQ495Y7 208 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 CRB2Q5IJ48 1285 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 GARNL3Q5VVW2 1013 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 PIWIL3Q7Z3Z3 882 aaKnown RBP14.47□□□□□ -0.09
COPS3-201ENST00000268717 C6orf120Q7Z4R8 191 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 GATAD2AQ86YP4 633 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 MCATQ8IVS2 390 aaKnown RBP14.47□□□□□ -0.09
COPS3-201ENST00000268717 SLC25A45Q8N413 288 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 OR56A1Q8NGH5 318 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 RHBDD1Q8TEB9 315 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 MAP3K3Q99759 626 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 DUSP23Q9BVJ7 150 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 OSBPL11Q9BXB4 747 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 FAM60AQ9NP50 221 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 IL1RAPQ9NPH3 570 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 SEMA5BQ9P283 1151 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 LRIT1Q9P2V4 623 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 PADI4Q9UM07 663 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 OAZ3Q9UMX2 235 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 RNF215Q9Y6U7 377 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 V9GYQ6 96 aa14.47□□□□□ -0.09
COPS3-201ENST00000268717 ACACBO00763 2458 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 FAM149AA5PLN7 773 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 UPK1AO00322 258 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 ERAL1O75616 437 aaKnown RBP14.46□□□□□ -0.09
COPS3-201ENST00000268717 SLITRK5O94991 958 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 EIF2S1P05198 315 aaKnown RBP14.46□□□□□ -0.09
COPS3-201ENST00000268717 RPSAP08865 295 aaKnown RBP14.46□□□□□ -0.09
COPS3-201ENST00000268717 GIMD1P0DJR0 217 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 CKMT2P17540 419 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 GPC1P35052 558 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 GABRA4P48169 554 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 EMP3P54852 163 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 FOLH1Q04609 750 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 MED21Q13503 144 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 RUNX2Q13950 521 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 NDUFA9Q16795 377 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 CEACAM20Q6UY09 585 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 GLRX5Q86SX6 157 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 PATL1Q86TB9 770 aaKnown RBP14.46□□□□□ -0.09
COPS3-201ENST00000268717 SVOPLQ8N434 492 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 OR6C4Q8NGE1 309 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 MIPOL1Q8TD10 442 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 UCN3Q969E3 161 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 NTN4Q9HB63 628 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 NLGN3Q9NZ94 848 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 NTMQ9P121 344 aa14.46□□□□□ -0.09
COPS3-201ENST00000268717 IGHV1OR21-1A0A087WYE8 117 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 BLACEA4D250 179 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 SUV39H1O43463 412 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 DUX1O43812 170 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 PRKRAO75569 313 aaKnown RBP14.45□□□□□ -0.1
COPS3-201ENST00000268717 ZBTB11O95625 1053 aaPredicted RBP14.45□□□□□ -0.1
COPS3-201ENST00000268717 ZNF682O95780 498 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 CST1P01037 141 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 FHP07954 510 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 PNLIPP16233 465 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 PRR5P85299 388 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 BNIP3Q12983 259 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 FAM53BQ14153 422 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 INAVAQ3KP66 663 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 TCTE1Q5JU00 501 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 REEP3Q6NUK4 255 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 FAM180BQ6P0A1 224 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 USP53Q70EK8 1073 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 KANSL1Q7Z3B3 1105 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 SLC35F3Q8IY50 421 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms