RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 GLIPR2Q9H4G4 154 aa8.81□□□□□ -1
SSR3-201ENST00000265044 ARMC7Q9H6L4 198 aa8.81□□□□□ -1
SSR3-201ENST00000265044 RASSF1Q9NS23 344 aa8.81□□□□□ -1
SSR3-201ENST00000265044 PCDHGB3Q9Y5G1 929 aa8.81□□□□□ -1
SSR3-201ENST00000265044 UGT2B17O75795 530 aa8.81□□□□□ -1
SSR3-201ENST00000265044 PDGFBP01127 241 aaPredicted RBP8.81□□□□□ -1
SSR3-201ENST00000265044 RYKP34925 604 aa8.81□□□□□ -1
SSR3-201ENST00000265044 GCKP35557 465 aa8.81□□□□□ -1
SSR3-201ENST00000265044 KRT20P35900 424 aa8.81□□□□□ -1
SSR3-201ENST00000265044 GFERP55789 205 aa8.81□□□□□ -1
SSR3-201ENST00000265044 WNT3P56703 355 aa8.81□□□□□ -1
SSR3-201ENST00000265044 TAS2R41P59536 307 aa8.81□□□□□ -1
SSR3-201ENST00000265044 VEZF1Q14119 521 aa8.81□□□□□ -1
SSR3-201ENST00000265044 NNATQ16517 81 aa8.81□□□□□ -1
SSR3-201ENST00000265044 C14orf28Q4W4Y0 310 aa8.81□□□□□ -1
SSR3-201ENST00000265044 C1orf189Q5VU69 101 aa8.81□□□□□ -1
SSR3-201ENST00000265044 ZNF793Q6ZN11 406 aa8.81□□□□□ -1
SSR3-201ENST00000265044 RNF111Q6ZNA4 994 aa8.81□□□□□ -1
SSR3-201ENST00000265044 ZZZ3Q8IYH5 903 aa8.81□□□□□ -1
SSR3-201ENST00000265044 HORMAD2Q8N7B1 307 aa8.81□□□□□ -1
SSR3-201ENST00000265044 TSPAN14Q8NG11 270 aa8.81□□□□□ -1
SSR3-201ENST00000265044 BAHD1Q8TBE0 780 aaPredicted RBP8.81□□□□□ -1
SSR3-201ENST00000265044 GEMIN6Q8WXD5 167 aaKnown RBP8.81□□□□□ -1
SSR3-201ENST00000265044 THAP11Q96EK4 314 aa8.81□□□□□ -1
SSR3-201ENST00000265044 NECAB3Q96P71 396 aaPredicted RBP8.81□□□□□ -1
SSR3-201ENST00000265044 DGAT2Q96PD7 388 aa8.81□□□□□ -1
SSR3-201ENST00000265044 GAL3ST4Q96RP7 486 aa8.81□□□□□ -1
SSR3-201ENST00000265044 SEMA6CQ9H3T2 930 aa8.81□□□□□ -1
SSR3-201ENST00000265044 PRTFDC1Q9NRG1 225 aa8.81□□□□□ -1
SSR3-201ENST00000265044 AGPAT4Q9NRZ5 378 aa8.81□□□□□ -1
SSR3-201ENST00000265044 PNPLA3Q9NST1 481 aa8.81□□□□□ -1
SSR3-201ENST00000265044 UCKL1Q9NWZ5 548 aa8.81□□□□□ -1
SSR3-201ENST00000265044 ZSCAN32Q9NX65 697 aa8.81□□□□□ -1
SSR3-201ENST00000265044 THUMPD1Q9NXG2 353 aaKnown RBP8.81□□□□□ -1
SSR3-201ENST00000265044 GIN1Q9NXP7 522 aa8.81□□□□□ -1
SSR3-201ENST00000265044 ZNF451Q9Y4E5 1061 aa8.81□□□□□ -1
SSR3-201ENST00000265044 RP1L1Q8IWN7 2480 aaPredicted RBP8.8□□□□□ -1
SSR3-201ENST00000265044 LMO7DNF2Z398 122 aa8.8□□□□□ -1
SSR3-201ENST00000265044 DNAJA1P31689 397 aaKnown RBP8.8□□□□□ -1
SSR3-201ENST00000265044 MRPL19P49406 292 aaKnown RBP8.8□□□□□ -1
SSR3-201ENST00000265044 RNF144AP50876 292 aaPredicted RBP8.8□□□□□ -1
SSR3-201ENST00000265044 MAT1AQ00266 395 aaKnown RBP8.8□□□□□ -1
SSR3-201ENST00000265044 GRM7Q14831 915 aa8.8□□□□□ -1
SSR3-201ENST00000265044 LARS2Q15031 903 aaKnown RBP8.8□□□□□ -1
SSR3-201ENST00000265044 LTB4RQ15722 352 aa8.8□□□□□ -1
SSR3-201ENST00000265044 ZNF311Q5JNZ3 666 aa8.8□□□□□ -1
SSR3-201ENST00000265044 ARHGAP40Q5TG30 622 aa8.8□□□□□ -1
SSR3-201ENST00000265044 ANKFN1Q8N957 763 aa8.8□□□□□ -1
SSR3-201ENST00000265044 TMEM102Q8N9M5 508 aaPredicted RBP8.8□□□□□ -1
SSR3-201ENST00000265044 GIPC3Q8TF64 312 aa8.8□□□□□ -1
SSR3-201ENST00000265044 SLCO4A1Q96BD0 722 aa8.8□□□□□ -1
SSR3-201ENST00000265044 FBXL20Q96IG2 436 aa8.8□□□□□ -1
SSR3-201ENST00000265044 APOL4Q9BPW4 351 aa8.8□□□□□ -1
SSR3-201ENST00000265044 C1GALT1Q9NS00 363 aa8.8□□□□□ -1
SSR3-201ENST00000265044 MKLN1Q9UL63 735 aa8.8□□□□□ -1
SSR3-201ENST00000265044 PLCL2Q9UPR0 1127 aa8.8□□□□□ -1
SSR3-201ENST00000265044 CLCA3PQ9Y6N3 262 aa8.8□□□□□ -1
SSR3-201ENST00000265044 IGKV1-8A0A0C4DH67 115 aa8.8□□□□□ -1
SSR3-201ENST00000265044 SERTM1A2A2V5 107 aa8.8□□□□□ -1
SSR3-201ENST00000265044 FAM221BA6H8Z2 402 aa8.8□□□□□ -1
SSR3-201ENST00000265044 FAM227AF5H4B4 570 aa8.8□□□□□ -1
SSR3-201ENST00000265044 ALOX5P09917 674 aa8.8□□□□□ -1
SSR3-201ENST00000265044 GSTM5P46439 218 aa8.8□□□□□ -1
SSR3-201ENST00000265044 ZFP36L2P47974 494 aaKnown RBP8.8□□□□□ -1
SSR3-201ENST00000265044 CLCN2P51788 898 aa8.8□□□□□ -1
SSR3-201ENST00000265044 NEDD8Q15843 81 aa8.8□□□□□ -1
SSR3-201ENST00000265044 RFX4Q33E94 735 aa8.8□□□□□ -1
SSR3-201ENST00000265044 PPP4R4Q6NUP7 873 aa8.8□□□□□ -1
SSR3-201ENST00000265044 PEX5LQ8IYB4 626 aa8.8□□□□□ -1
SSR3-201ENST00000265044 UCN3Q969E3 161 aa8.8□□□□□ -1
SSR3-201ENST00000265044 GUCD1Q96NT3 240 aa8.8□□□□□ -1
SSR3-201ENST00000265044 AMDHD1Q96NU7 426 aa8.8□□□□□ -1
SSR3-201ENST00000265044 GAREM1Q9H706 876 aa8.8□□□□□ -1
SSR3-201ENST00000265044 C8orf4Q9NR00 106 aa8.8□□□□□ -1
SSR3-201ENST00000265044 ACSS1Q9NUB1 689 aaPredicted RBP8.8□□□□□ -1
SSR3-201ENST00000265044 CALML5Q9NZT1 146 aa8.8□□□□□ -1
SSR3-201ENST00000265044 PCOLCE2Q9UKZ9 415 aa8.8□□□□□ -1
SSR3-201ENST00000265044 CDC14AQ9UNH5 594 aa8.8□□□□□ -1
SSR3-201ENST00000265044 WDR45Q9Y484 360 aa8.8□□□□□ -1
SSR3-201ENST00000265044 TRANK1O15050 2925 aa8.8□□□□□ -1
SSR3-201ENST00000265044 CHST10O43529 356 aa8.8□□□□□ -1
SSR3-201ENST00000265044 ALPPP05187 535 aa8.8□□□□□ -1
SSR3-201ENST00000265044 PEBP1P30086 187 aaKnown RBP8.8□□□□□ -1
SSR3-201ENST00000265044 ATP6V1E1P36543 226 aa8.8□□□□□ -1
SSR3-201ENST00000265044 CAPGP40121 348 aa8.8□□□□□ -1
SSR3-201ENST00000265044 ALDH3A2P51648 485 aa8.8□□□□□ -1
SSR3-201ENST00000265044 GPR19Q15760 415 aa8.8□□□□□ -1
SSR3-201ENST00000265044 SYPL1Q16563 259 aa8.8□□□□□ -1
SSR3-201ENST00000265044 DCST1Q5T197 706 aa8.8□□□□□ -1
SSR3-201ENST00000265044 MLIPQ5VWP3 458 aa8.8□□□□□ -1
SSR3-201ENST00000265044 GPR153Q6NV75 609 aa8.8□□□□□ -1
SSR3-201ENST00000265044 OLIG3Q7RTU3 272 aa8.8□□□□□ -1
SSR3-201ENST00000265044 SLC30A8Q8IWU4 369 aa8.8□□□□□ -1
SSR3-201ENST00000265044 EID2Q8N6I1 236 aa8.8□□□□□ -1
SSR3-201ENST00000265044 SETD9Q8NE22 299 aa8.8□□□□□ -1
SSR3-201ENST00000265044 CREB3L4Q8TEY5 395 aa8.8□□□□□ -1
SSR3-201ENST00000265044 PLEKHA8Q96JA3 519 aa8.8□□□□□ -1
SSR3-201ENST00000265044 ELF4Q99607 663 aaPredicted RBP8.8□□□□□ -1
SSR3-201ENST00000265044 TEX12Q9BXU0 123 aa8.8□□□□□ -1
SSR3-201ENST00000265044 SLC52A3Q9NQ40 469 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms