RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 ADGRF1Q5T601 910 aa12.34□□□□□ -0.43
TTC39A-202ENST00000262676 GOLGA7Q7Z5G4 137 aa12.34□□□□□ -0.43
TTC39A-202ENST00000262676 GPR149Q86SP6 731 aa12.34□□□□□ -0.43
TTC39A-202ENST00000262676 C7orf43Q8WVR3 580 aa12.34□□□□□ -0.43
TTC39A-202ENST00000262676 DEDD2Q8WXF8 326 aa12.34□□□□□ -0.43
TTC39A-202ENST00000262676 NKD2Q969F2 451 aaPredicted RBP12.34□□□□□ -0.43
TTC39A-202ENST00000262676 SECISBP2Q96T21 854 aaKnown RBP12.34□□□□□ -0.43
TTC39A-202ENST00000262676 MMP27Q9H306 513 aa12.34□□□□□ -0.43
TTC39A-202ENST00000262676 ACSL5Q9ULC5 683 aa12.34□□□□□ -0.43
TTC39A-202ENST00000262676 LSM5Q9Y4Y9 91 aaKnown RBP12.34□□□□□ -0.43
TTC39A-202ENST00000262676 ROBO3Q96MS0 1386 aa12.34□□□□□ -0.43
TTC39A-202ENST00000262676 MAS1P04201 325 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 CYBAP13498 195 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 CLEC20AQ6ZU45 233 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.33□□□□□ -0.44
TTC39A-202ENST00000262676 RHBDD1Q8TEB9 315 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 THAP4Q8WY91 577 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 SDSLQ96GA7 329 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 RETREG1Q9H6L5 497 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 DNMT3AQ9Y6K1 912 aaPredicted RBP12.33□□□□□ -0.44
TTC39A-202ENST00000262676 MYOGP15173 224 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 ANKRD54Q6NXT1 300 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 FBXL16Q8N461 479 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 FUBP3Q96I24 572 aaKnown RBP eCLIP12.33□□□□□ -0.44
TTC39A-202ENST00000262676 KIF13AQ9H1H9 1805 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 PAK1IP1Q9NWT1 392 aaPredicted RBP12.33□□□□□ -0.44
TTC39A-202ENST00000262676 CLEC4EQ9ULY5 219 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 SLC7A4O43246 635 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 CREBL2O60519 120 aaPredicted RBP12.33□□□□□ -0.44
TTC39A-202ENST00000262676 RAB6AP20340 208 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 CDK3Q00526 305 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 USP53Q70EK8 1073 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 ZIM2Q9NZV7 527 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 A8MT66 165 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 RPS13P62277 151 aaKnown RBP12.33□□□□□ -0.44
TTC39A-202ENST00000262676 SYPL2Q5VXT5 272 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 HMGN2P46Q86SG4 172 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 OR4E2Q8NGC2 313 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 NECTIN4Q96NY8 510 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 MYEF2Q9P2K5 600 aaKnown RBP12.33□□□□□ -0.44
TTC39A-202ENST00000262676 LOC730098B7Z3J9 87 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 IRF2P14316 349 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 CLCNKAP51800 687 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 FRG2Q64ET8 278 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 PTCRAQ6ISU1 281 aaPredicted RBP12.33□□□□□ -0.44
TTC39A-202ENST00000262676 FAM198BQ6UWH4 519 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 ERMP1Q7Z2K6 904 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 TRIM46Q7Z4K8 759 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 CARM1Q86X55 608 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 CHPT1Q8WUD6 406 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 FRG2BQ96QU4 278 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 ADAMTS10Q9H324 1103 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 SUV39H2Q9H5I1 410 aa12.33□□□□□ -0.44
TTC39A-202ENST00000262676 OR6C65A6NJZ3 312 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 G6PDP11413 515 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 GK2Q14410 553 aaPredicted RBP12.32□□□□□ -0.44
TTC39A-202ENST00000262676 OR4F6Q8NGB9 312 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 SORCS1Q8WY21 1168 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 SOX17Q9H6I2 414 aaPredicted RBP12.32□□□□□ -0.44
TTC39A-202ENST00000262676 TSTD3H0UI37 97 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 RGS9O75916 674 aaPredicted RBP12.32□□□□□ -0.44
TTC39A-202ENST00000262676 CHRNB1P11230 501 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 RPL26P61254 145 aaKnown RBP12.32□□□□□ -0.44
TTC39A-202ENST00000262676 ZNF423Q2M1K9 1284 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 RABL3Q5HYI8 236 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 DPY19L3Q6ZPD9 716 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 OR9I1Q8NGQ6 314 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 RBP7Q96R05 134 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 SAMD10Q9BYL1 202 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 SLC2A4RGQ9NR83 387 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 PPP1R14DQ9NXH3 145 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 FBXW11Q9UKB1 542 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 BACE2Q9Y5Z0 518 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 GLOD5A6NK44 160 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 KCNC4Q03721 635 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 PMS2P3Q13401 168 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 MRPL49Q13405 166 aaKnown RBP12.32□□□□□ -0.44
TTC39A-202ENST00000262676 EIF2B1Q14232 305 aaKnown RBP12.32□□□□□ -0.44
TTC39A-202ENST00000262676 GINS1Q14691 196 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 RELL1Q8IUW5 271 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 KCNA7Q96RP8 456 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 ZNF442Q9H7R0 627 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 ASB6Q9NWX5 421 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 ACTR3BQ9P1U1 418 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 TCRBV7S3A2A0A539 114 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 A6NLC8 198 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 TGM5O43548 720 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 NR2C1P13056 603 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 AGTR1P30556 359 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 L1CAMP32004 1257 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 PIK3CBP42338 1070 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 HSD11B2P80365 405 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 FAM205BPQ63HN1 556 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 TMEM225Q6GV28 225 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 TTLL10Q6ZVT0 673 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 BBS1Q8NFJ9 593 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 PROKR1Q8TCW9 393 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 MYLIPQ8WY64 445 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 DCUN1D4Q92564 292 aa12.32□□□□□ -0.44
TTC39A-202ENST00000262676 GCM1Q9NP62 436 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms