RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 CTSL3PQ5NE16 218 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 OTUD1Q5VV17 481 aaPredicted RBP15.47■□□□□ 0.07
SREBF1-201ENST00000261646 TMED4Q7Z7H5 227 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 YAF2Q8IY57 180 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 NXPE2Q96DL1 559 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 YIPF6Q96EC8 236 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 TMEM19Q96HH6 336 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 RIPOR3Q96MK2 946 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 CDADC1Q9BWV3 514 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 OR51J1Q9H342 316 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 GALNT9Q9HCQ5 603 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 HMX1Q9NP08 348 aaPredicted RBP15.47■□□□□ 0.07
SREBF1-201ENST00000261646 IL26Q9NPH9 171 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 SLC35C2Q9NQQ7 365 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 RBFOX1Q9NWB1 397 aaKnown RBP15.47■□□□□ 0.07
SREBF1-201ENST00000261646 GLTPQ9NZD2 209 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 KANTRA0A1W2PQU2 76 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 H3BSH0 61 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 CSN2P05814 226 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 AMD1P17707 334 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 UQCRC2P22695 453 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 KELP23276 732 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 RPS26P11Q5JNZ5 115 aaPredicted RBP15.47■□□□□ 0.07
SREBF1-201ENST00000261646 RAB41Q5JT25 222 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 SLC16A12Q6ZSM3 486 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 MEX3DQ86XN8 651 aaKnown RBP15.47■□□□□ 0.07
SREBF1-201ENST00000261646 PROKR2Q8NFJ6 384 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 KCNK12Q9HB15 430 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 ADAP2Q9NPF8 381 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 HPF1Q9NWY4 346 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 OR10H1Q9Y4A9 318 aa15.47■□□□□ 0.07
SREBF1-201ENST00000261646 IL1AP01583 271 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 IFNA6P05013 189 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 RING1Q06587 406 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 SGCGQ13326 291 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 GPR68Q15743 365 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 TRIB3Q96RU7 358 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 MNTQ99583 582 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 NIPSNAP1Q9BPW8 284 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 PCDHGA6Q9Y5G7 932 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 ANHXE9PGG2 379 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 RTCAO00442 366 aaKnown RBP15.46■□□□□ 0.07
SREBF1-201ENST00000261646 PRKYO43930 277 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 OR10H2O60403 315 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 FMO6PO60774 539 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 KCNK2O95069 426 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 KCNK5O95279 499 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 HIST1H2ABP04908 130 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 C8orf89P0DMQ9 161 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 BPIP17213 487 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 EDNRAP25101 427 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 TRAM2Q15035 370 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 ZNHIT3Q15649 155 aaPredicted RBP15.46■□□□□ 0.07
SREBF1-201ENST00000261646 MTFR2Q6P444 385 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 ARSKQ6UWY0 536 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 Q6ZVU0 165 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 HIST3H2AQ7L7L0 130 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 ZNF551Q7Z340 670 aaPredicted RBP15.46■□□□□ 0.07
SREBF1-201ENST00000261646 C6orf120Q7Z4R8 191 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 UBE2Q1Q7Z7E8 422 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 MFSD4AQ8N468 514 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 ACBD7Q8N6N7 88 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 OSTF1Q92882 214 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 HIST1H2ACQ93077 130 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 OR10A4Q9H209 315 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 SLC39A1Q9NY26 324 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 ATPIF1Q9UII2 106 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 NDRG4Q9ULP0 352 aaKnown RBP15.46■□□□□ 0.07
SREBF1-201ENST00000261646 ASB1Q9Y576 335 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 CFAP20Q9Y6A4 193 aaKnown RBP15.46■□□□□ 0.07
SREBF1-201ENST00000261646 CACNA1CQ13936 2221 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 GABRR3A8MPY1 467 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 JUNDP17535 347 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 FAM46CQ5VWP2 391 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 SLC30A6Q6NXT4 461 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 KRT77Q7Z794 578 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 IQCF2Q8IXL9 164 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 PGBD5Q8N414 524 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 MOSPD2Q8NHP6 518 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 CLIP3Q96DZ5 547 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 THAP7Q9BT49 309 aaPredicted RBP15.46■□□□□ 0.07
SREBF1-201ENST00000261646 CDH10Q9Y6N8 788 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 STRCQ7RTU9 1775 aa15.46■□□□□ 0.07
SREBF1-201ENST00000261646 MTMR11A4FU01 709 aa15.46■□□□□ 0.06
SREBF1-201ENST00000261646 E7EQ34 232 aa15.46■□□□□ 0.06
SREBF1-201ENST00000261646 RPP14O95059 124 aaKnown RBP15.46■□□□□ 0.06
SREBF1-201ENST00000261646 ARSBP15848 533 aa15.46■□□□□ 0.06
SREBF1-201ENST00000261646 ZNF10P21506 573 aaPredicted RBP15.46■□□□□ 0.06
SREBF1-201ENST00000261646 RRAS2P62070 204 aaPredicted RBP15.46■□□□□ 0.06
SREBF1-201ENST00000261646 SLC9A5Q14940 896 aa15.46■□□□□ 0.06
SREBF1-201ENST00000261646 NKG7Q16617 165 aa15.46■□□□□ 0.06
SREBF1-201ENST00000261646 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.46■□□□□ 0.062e-6■■■■■ 40.4
SREBF1-201ENST00000261646 TSEN15Q8WW01 171 aaKnown RBP15.46■□□□□ 0.06
SREBF1-201ENST00000261646 ZNF419Q96HQ0 510 aaPredicted RBP15.46■□□□□ 0.06
SREBF1-201ENST00000261646 TREM1Q9NP99 234 aa15.46■□□□□ 0.06
SREBF1-201ENST00000261646 SLC25A37Q9NYZ2 338 aa15.46■□□□□ 0.06
SREBF1-201ENST00000261646 TAC3Q9UHF0 121 aa15.46■□□□□ 0.06
SREBF1-201ENST00000261646 OSGIN1Q9UJX0 560 aa15.46■□□□□ 0.06
SREBF1-201ENST00000261646 A0A1W2PRQ8 180 aa15.45■□□□□ 0.06
SREBF1-201ENST00000261646 VSX2P58304 361 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms