RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 LAIR2Q6ISS4 152 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 FAM92BQ6ZTR7 304 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 CCDC28AQ8IWP9 274 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.63□□□□□ -0.87
PALB2-201ENST00000261584 FAM98AQ8NCA5 519 aaKnown RBP9.63□□□□□ -0.87
PALB2-201ENST00000261584 TRPV1Q8NER1 839 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 ADAMTS15Q8TE58 950 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 MAGEB10Q96LZ2 347 aaPredicted RBP9.63□□□□□ -0.87
PALB2-201ENST00000261584 SYT17Q9BSW7 474 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 IFT27Q9BW83 186 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 C12orf4Q9NQ89 552 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 HCFC1R1Q9NWW0 138 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 MGAT4AQ9UM21 535 aa9.63□□□□□ -0.87
PALB2-201ENST00000261584 ATAD5Q96QE3 1844 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 DSCR3O14972 297 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 POP4O95707 220 aaKnown RBP9.62□□□□□ -0.87
PALB2-201ENST00000261584 HOXA9P31269 272 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 VIPR1P32241 457 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 SOX18P35713 384 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 SOX2P48431 317 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 SRP9P49458 86 aaKnown RBP9.62□□□□□ -0.87
PALB2-201ENST00000261584 HNRNPFP52597 415 aaKnown RBP9.62□□□□□ -0.87
PALB2-201ENST00000261584 NTHL1P78549 312 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 MTA1Q13330 715 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 LRRC37A5PQ49AS3 106 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 GPR33Q49SQ1 333 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 FBXO43Q4G163 708 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 LY6G5CQ5SRR4 150 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 ANKRD54Q6NXT1 300 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 MZT2AQ6P582 158 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 C22orf39Q6P5X5 142 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 GDPD4Q6W3E5 623 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 ESPNLQ6ZVH7 1005 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 MEIOBQ8N635 442 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 TEX26Q8N6G2 289 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 COQ8AQ8NI60 647 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 SOCS4Q8WXH5 440 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 YIPF6Q96EC8 236 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 OR51I1Q9H343 314 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 ENOPH1Q9UHY7 261 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 ADAM30Q9UKF2 790 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 NCKAP1Q9Y2A7 1128 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 NTNG1Q9Y2I2 539 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 HOXC11O43248 304 aaPredicted RBP9.62□□□□□ -0.87
PALB2-201ENST00000261584 AOC2O75106 756 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 OAZ2O95190 189 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 IGLV3-25P01717 112 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 AHRP35869 848 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 MAPK9P45984 424 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 LGALS3BPQ08380 585 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 NKD1Q969G9 470 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 CRELD1Q96HD1 420 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 SAMD11Q96NU1 681 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 DOK1Q99704 481 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 KATNBL1Q9H079 304 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 MAGIXQ9H6Y5 334 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 NDRG4Q9ULP0 352 aaKnown RBP9.62□□□□□ -0.87
PALB2-201ENST00000261584 MGAT4BQ9UQ53 548 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 UBR3Q6ZT12 1888 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 DOCK3Q8IZD9 2030 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 DRGXA6NNA5 263 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 SLC31A1O15431 190 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 CAPN5O15484 640 aaPredicted RBP9.62□□□□□ -0.87
PALB2-201ENST00000261584 RAD1O60671 282 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 ITGAMP11215 1152 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 CD9P21926 228 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 LHCGRP22888 699 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 MAB21L1Q13394 359 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 P2RY14Q15391 338 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 C8orf82Q6P1X6 216 aaPredicted RBP9.62□□□□□ -0.87
PALB2-201ENST00000261584 PTOV1Q86YD1 416 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 OXR1Q8N573 874 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 ZFPM2Q8WW38 1151 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 GCDHQ92947 438 aaPredicted RBP9.62□□□□□ -0.87
PALB2-201ENST00000261584 TRIB3Q96RU7 358 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 ZCCHC2Q9C0B9 1178 aaKnown RBP9.62□□□□□ -0.87
PALB2-201ENST00000261584 MYEF2Q9P2K5 600 aaKnown RBP9.62□□□□□ -0.87
PALB2-201ENST00000261584 LHX3Q9UBR4 397 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 SEC14L4Q9UDX3 406 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 ALG5Q9Y673 324 aa9.62□□□□□ -0.87
PALB2-201ENST00000261584 NARSO43776 548 aaKnown RBP9.61□□□□□ -0.87
PALB2-201ENST00000261584 ZNF311Q5JNZ3 666 aa9.61□□□□□ -0.87
PALB2-201ENST00000261584 FAM27D1Q5T7N8 215 aa9.61□□□□□ -0.87
PALB2-201ENST00000261584 OTPQ5XKR4 325 aa9.61□□□□□ -0.87
PALB2-201ENST00000261584 TMEM107Q6UX40 140 aa9.61□□□□□ -0.87
PALB2-201ENST00000261584 ZNF367Q7RTV3 350 aa9.61□□□□□ -0.87
PALB2-201ENST00000261584 HORMAD2Q8N7B1 307 aa9.61□□□□□ -0.87
PALB2-201ENST00000261584 OR5AR1Q8NGP9 310 aa9.61□□□□□ -0.87
PALB2-201ENST00000261584 ORAI1Q96D31 301 aa9.61□□□□□ -0.87
PALB2-201ENST00000261584 OTUB2Q96DC9 234 aa9.61□□□□□ -0.87
PALB2-201ENST00000261584 GSDMCQ9BYG8 508 aa9.61□□□□□ -0.87
PALB2-201ENST00000261584 ASAH2Q9NR71 780 aa9.61□□□□□ -0.87
PALB2-201ENST00000261584 NEU3Q9UQ49 428 aa9.61□□□□□ -0.87
PALB2-201ENST00000261584 IRAK3Q9Y616 596 aa9.61□□□□□ -0.87
PALB2-201ENST00000261584 LY75O60449 1722 aa9.61□□□□□ -0.87
PALB2-201ENST00000261584 POLR2AP24928 1970 aaKnown RBP9.61□□□□□ -0.87
PALB2-201ENST00000261584 COL24A1Q17RW2 1714 aa9.61□□□□□ -0.87
PALB2-201ENST00000261584 ZNF623O75123 536 aa9.61□□□□□ -0.87
PALB2-201ENST00000261584 CXCL14O95715 111 aa9.61□□□□□ -0.87
PALB2-201ENST00000261584 HLA-DQA2P01906 255 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms