RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 NXPE4Q6UWF7 544 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.57□□□□□ -0.56
COL8A1-201ENST00000261037 PSD4Q8NDX1 1056 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 OR8J3Q8NGG0 315 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 OR56A3Q8NH54 315 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 NEIL3Q8TAT5 605 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 ELP5Q8TE02 316 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 SMARCD2Q92925 531 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 SECISBP2Q96T21 854 aaKnown RBP11.57□□□□□ -0.56
COL8A1-201ENST00000261037 FN3KQ9H479 309 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 MTMR10Q9NXD2 777 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 PCDHGA6Q9Y5G7 932 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 ISPDA4D126 451 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 UNCXA6NJT0 531 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 I3L521 148 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 SCAMP2O15127 329 aaKnown RBP11.57□□□□□ -0.56
COL8A1-201ENST00000261037 SLC16A5O15375 505 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 TYROBPO43914 113 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 OR2B3O76000 313 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 FARS2O95363 451 aaKnown RBP11.57□□□□□ -0.56
COL8A1-201ENST00000261037 SLC35E2BP0CK96 405 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 ZNF182P17025 639 aaPredicted RBP11.57□□□□□ -0.56
COL8A1-201ENST00000261037 RPS3P23396 243 aaKnown RBP eCLIP11.57□□□□□ -0.56
COL8A1-201ENST00000261037 NFE2L1Q14494 772 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 C3orf33Q6P1S2 294 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 LRFN4Q6PJG9 635 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 SHFQ7M4L6 423 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 KLBQ86Z14 1044 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 CLECL1Q8IZS7 167 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 IL22RA1Q8N6P7 574 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 HUS1BQ8NHY5 278 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 RFT1Q96AA3 541 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 PGAM5Q96HS1 289 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 FAM46AQ96IP4 442 aaKnown RBP11.57□□□□□ -0.56
COL8A1-201ENST00000261037 PDE7BQ9NP56 450 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 SLCO3A1Q9UIG8 710 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 ANHXE9PGG2 379 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 TP53I11O14683 189 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 KCNAB2Q13303 367 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 ZNF783Q6ZMS7 281 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 SPAG16Q8N0X2 631 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 OR10A4Q9H209 315 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 CREBZFQ9NS37 354 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 IL20RAQ9UHF4 553 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 SCP2D1Q9UJQ7 156 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 AHDC1Q5TGY3 1603 aaPredicted RBP11.57□□□□□ -0.56
COL8A1-201ENST00000261037 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 IQCF3P0C7M6 154 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 JUPP14923 745 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 OTX2P32243 289 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 SHC2P98077 582 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 TUBA3CQ13748 450 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 CDNFQ49AH0 187 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 ATG9BQ674R7 924 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 SLC27A4Q6P1M0 643 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 OR6Q1Q8NGQ2 317 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 TMEM234Q8WY98 164 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 PCDHGA2Q9Y5H1 932 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 DLGAP1O14490 977 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 TNFRSF1BP20333 461 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 LRIF1Q5T3J3 769 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 C6orf183Q5T699 404 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 TRIM73Q86UV7 250 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 DZANK1Q9NVP4 752 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 C5AR2Q9P296 337 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 ADAMTS6Q9UKP5 1117 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 NFS1Q9Y697 457 aa11.57□□□□□ -0.56
COL8A1-201ENST00000261037 A0A1B0GVC2 190 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 CIB4A0PJX0 185 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 SLITRK5O94991 958 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 RASAL1O95294 804 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 NIPAL4Q0D2K0 466 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 CCDC58Q4VC31 144 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 TMEM69Q5SWH9 247 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 C6orf120Q7Z4R8 191 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 TMPRSS12Q86WS5 348 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.56□□□□□ -0.56
COL8A1-201ENST00000261037 ZNF100Q8IYN0 542 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 TMEM151AQ8N4L1 468 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 MKLN1Q9UL63 735 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 C1orf226A1L170 272 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 TGM5O43548 720 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 EEDO75530 441 aaKnown RBP11.56□□□□□ -0.56
COL8A1-201ENST00000261037 FASLGP48023 281 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 ARSDP51689 593 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 RPS15AP62244 130 aaKnown RBP11.56□□□□□ -0.56
COL8A1-201ENST00000261037 SIM1P81133 766 aaPredicted RBP11.56□□□□□ -0.56
COL8A1-201ENST00000261037 ZNF584Q8IVC4 421 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 MAL2Q969L2 176 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 MYEF2Q9P2K5 600 aaKnown RBP11.56□□□□□ -0.56
COL8A1-201ENST00000261037 DOT1LQ8TEK3 1739 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 CNOT4O95628 575 aaKnown RBP11.56□□□□□ -0.56
COL8A1-201ENST00000261037 MPP2Q14168 576 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 VMACQ2NL98 169 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 FAM214AQ32MH5 1076 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 CDHR3Q6ZTQ4 885 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 OR52B6Q8NGF0 335 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 ZDHHC1Q8WTX9 485 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 POU2F3Q9UKI9 436 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 BHMG1C9JSJ3 638 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms