RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 TMEM52BQ4KMG9 183 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 XKR6Q5GH73 641 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 TMEM220Q6QAJ8 160 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 METAP1DQ6UB28 335 aaPredicted RBP10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 ZNF782Q6ZMW2 699 aaPredicted RBP10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 PTCHD4Q6ZW05 846 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 TRIM48Q8IWZ4 208 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 C11orf65Q8NCR3 313 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 FAM46DQ8NEK8 389 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 OR4M1Q8NGD0 313 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 SPPL2AQ8TCT8 520 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 KLHL6Q8WZ60 621 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 SMARCD2Q92925 531 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 NACC2Q96BF6 587 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 NUS1Q96E22 293 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 APIPQ96GX9 242 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 TMEM80Q96HE8 168 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 LINC00615Q96LM1 132 aaPredicted RBP10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 HYLS1Q96M11 299 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 MED18Q9BUE0 208 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 MND1Q9BWT6 205 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 BEX2Q9BXY8 128 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 UCK2Q9BZX2 261 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 SPATA6Q9NWH7 488 aaPredicted RBP10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 VPS29Q9UBQ0 182 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 EIF3KQ9UBQ5 218 aaKnown RBP10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 FTSJ1Q9UET6 329 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 TEKT2Q9UIF3 430 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 ZNF451Q9Y4E5 1061 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 PCDHGB7Q9Y5F8 929 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 AUP1Q9Y679 476 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 KCNE2Q9Y6J6 123 aa10.28□□□□□ -0.76
CHRNA1-201ENST00000261007 CEP350Q5VT06 3117 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 LINC00854A0A1B0GVQ3 168 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 PRR23AA6NEV1 266 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 SLC43A1O75387 559 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 C1QCP02747 245 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 TSPAN19P0C672 248 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 CBLP22681 906 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 GPC1P35052 558 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 LIMS1P48059 325 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 CRISP1P54107 249 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 ZXDCQ2QGD7 858 aaPredicted RBP10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 SPIN4Q56A73 249 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 TMEM201Q5SNT2 666 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 DDI2Q5TDH0 399 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 ZNF697Q5TEC3 545 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 LAMTOR1Q6IAA8 161 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 FAM92BQ6ZTR7 304 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 HDDC2Q7Z4H3 204 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 UBE2Q1Q7Z7E8 422 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 GLRX5Q86SX6 157 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 AMIGO1Q86WK6 493 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 SYT12Q8IV01 421 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 NANOGP1Q8N7R0 232 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 TP53I13Q8NBR0 393 aaPredicted RBP10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 LSM14AQ8ND56 463 aaKnown RBP10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 PROKR2Q8NFJ6 384 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 VANGL1Q8TAA9 524 aaPredicted RBP10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 WDR20Q8TBZ3 569 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 AP3S1Q92572 193 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 DIRAS2Q96HU8 199 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 ATG10Q9H0Y0 220 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 DPEP2Q9H4A9 486 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 RBFOX1Q9NWB1 397 aaKnown RBP10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 GDE1Q9NZC3 331 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 MBD1Q9UIS9 605 aaPredicted RBP10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 GPR34Q9UPC5 381 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 ALG5Q9Y673 324 aa10.27□□□□□ -0.77
CHRNA1-201ENST00000261007 A0A1W2PQL4 384 aaPredicted RBP10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 C1orf226A1L170 272 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 TPST2O60704 377 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 CSO75390 466 aaKnown RBP10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 GCM2O75603 506 aaPredicted RBP10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 CPSF4O95639 269 aaKnown RBP10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 COX7A2P14406 83 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 GPR1P46091 355 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 SLC9A3P48764 834 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 CTSCP53634 463 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 CDH12P55289 794 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 CLDN20P56880 219 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 RRAS2P62070 204 aaPredicted RBP10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 ACSM2AQ08AH3 577 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 GPM6BQ13491 265 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 NAE1Q13564 534 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 GRIN2CQ14957 1233 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 RGNQ15493 299 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 PYDC2Q56P42 97 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 C9orf64Q5T6V5 341 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 ACSM2BQ68CK6 577 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 FRMPD2BQ6IN97 320 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 NLGN4YQ8NFZ3 816 aaPredicted RBP10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 CXorf40BQ96DE9 158 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 APOLD1Q96LR9 279 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 ASB16Q96NS5 453 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 EFCAB11Q9BUY7 163 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 LMAN2LQ9H0V9 348 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms