RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 COL21A1Q96P44 957 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 ZNF576Q9H609 170 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 SYNPO2LQ9H987 977 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 PCDHGA10Q9Y5H3 936 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 TRBC2A0A5B9 178 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 CAPN5O15484 640 aaPredicted RBP13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 FRS3O43559 492 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 KLHL18O94889 574 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 CXCR2P25025 360 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 SERPINB1P30740 379 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 PRDX1Q06830 199 aaKnown RBP13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 RAB30Q15771 203 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 DEFB134Q4QY38 66 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 ZNF691Q5VV52 312 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 KIAA1614Q5VZ46 1190 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 EIF3MQ7L2H7 374 aaKnown RBP13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 GATAD2AQ86YP4 633 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 HIPK1Q86Z02 1210 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 KLHDC8AQ8IYD2 350 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 RGMAQ96B86 450 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 C11orf24Q96F05 449 aaPredicted RBP13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 DHRS1Q96LJ7 313 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 MS4A8Q9BY19 250 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 RBCK1Q9BYM8 510 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 BTBD1Q9H0C5 482 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 TMEFF2Q9UIK5 374 aaPredicted RBP13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 ACSL5Q9ULC5 683 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 ICKQ9UPZ9 632 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 C1orf226A1L170 272 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 ZW10O43264 779 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 PRMT3O60678 531 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 CELA2BP08218 269 aaPredicted RBP13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 NR2F1P10589 423 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 ITIH1P19827 911 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 CCT3P49368 545 aaKnown RBP13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 DSTNP60981 165 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 GPR19Q15760 415 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 SYPL1Q16563 259 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 DEFB110Q30KQ9 67 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 PRRT3Q5FWE3 981 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 ZNF793Q6ZN11 406 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 C6orf120Q7Z4R8 191 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 SETD7Q8WTS6 366 aaKnown RBP13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 TMEM45AQ9NWC5 275 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 C2orf42Q9NWW7 574 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 ATG4BQ9Y4P1 393 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 ZDBF2Q9HCK1 2354 aa13.88□□□□□ -0.19
TRAFD1-201ENST00000257604 FOXE1O00358 373 aaPredicted RBP13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 RNASET2O00584 256 aaKnown RBP13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 PCDH17O14917 1159 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 FAM20BO75063 409 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 TPMTP51580 245 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 LEXMQ3ZCV2 418 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 UBE2UQ5VVX9 321 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 TMEM107Q6UX40 140 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 CBLL1Q75N03 491 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 CCDC103Q8IW40 242 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 SLC5A8Q8N695 610 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 OR6Q1Q8NGQ2 317 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 COQ8BQ96D53 544 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 C1QTNF7Q9BXJ2 289 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 C1QTNF2Q9BXJ5 285 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 BHLHE41Q9C0J9 482 aaPredicted RBP13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 C4orf51C9J302 202 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 GCM2O75603 506 aaPredicted RBP13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 GABARAPO95166 117 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 TRIM23P36406 574 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 BUD31P41223 144 aaPredicted RBP13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 HOXC5Q00444 222 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 SRSF5Q13243 272 aaKnown RBP13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 ADAM15Q13444 863 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 EXOC3L2Q2M3D2 409 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 AGAP7PQ5VUJ5 663 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 ERICH5Q6P6B1 374 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 RASGRP3Q8IV61 690 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 SYNPOQ8N3V7 929 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 PROX1Q92786 737 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 LGALS12Q96DT0 336 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 OR2M4Q96R27 311 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 DOHHQ9BU89 302 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 C14orf119Q9NWQ9 140 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 BTNL2Q9UIR0 455 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 CLCA2Q9UQC9 943 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 C21orf33P30042 268 aaPredicted RBP13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 DNAJA1P31689 397 aaKnown RBP13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 BSGP35613 385 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 FXNQ16595 210 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 GPAT3Q53EU6 434 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 OR4C11Q6IEV9 310 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 CCDC80Q76M96 950 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 UBE2J2Q8N2K1 259 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 MCFD2Q8NI22 146 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 PHF10Q8WUB8 498 aaKnown RBP13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 TMEM19Q96HH6 336 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 GPR174Q9BXC1 333 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 C6orf106Q9H6K1 298 aaPredicted RBP13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 TRPV4Q9HBA0 871 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 KLHL3Q9UH77 587 aa13.87□□□□□ -0.19
TRAFD1-201ENST00000257604 SLCO1B1Q9Y6L6 691 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms