RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 OR51L1Q8NGJ5 315 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 CREB3L4Q8TEY5 395 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 RAB7BQ96AH8 199 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 G6PC3Q9BUM1 346 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 PADI2Q9Y2J8 665 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 IFT52Q9Y366 437 aa17.86■□□□□ 0.45
SMARCC1-201ENST00000254480 SLC16A8O95907 504 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 THEGLP0DJG4 465 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 NTSR1P30989 418 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 PYCR1P32322 319 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 GJA8P48165 433 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 PLP2Q04941 152 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 ZSWIM9Q86XI8 627 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 EEF1E1O43324 174 aaKnown RBP17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 IST1P53990 364 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 GTDC1Q4AE62 458 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 SLC25A25Q6KCM7 469 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 KLHDC8AQ8IYD2 350 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 SORBS1Q9BX66 1292 aaKnown RBP17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 TMEM5Q9Y2B1 443 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 PCDHGA2Q9Y5H1 932 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 A6NLC8 198 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 GPR39O43194 453 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 MAP4K2Q12851 820 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 XKRXQ6PP77 449 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 ZDHHC1Q8WTX9 485 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 INPP5KQ9BT40 448 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 VEGFDO43915 354 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 KCNJ13O60928 360 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 MAS1P04201 325 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 SFTPBP07988 381 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 RBM34P42696 430 aaKnown RBP17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 MECP2P51608 486 aaKnown RBP17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 MVKQ03426 396 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 IQCF1Q8N6M8 205 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 AIG1Q9NVV5 245 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 EPHA6Q9UF33 1036 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 NUFIP1Q9UHK0 495 aaKnown RBP17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 SMAD6O43541 496 aaKnown RBP17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 FDXRP22570 491 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 MAOBP27338 520 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 GLP1RP43220 463 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 GRIK2Q13002 908 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 TIMM8BQ9Y5J9 83 aaPredicted RBP17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 DNAJC15Q9Y5T4 150 aa17.85■□□□□ 0.45
SMARCC1-201ENST00000254480 YY2O15391 372 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 GJB3O75712 270 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 KDELR2P33947 212 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 CD68P34810 354 aaPredicted RBP17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 BMPR1AP36894 532 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 ERVPABLB-1P60509 514 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 E2F1Q01094 437 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 RAB39AQ14964 217 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 DIO2Q92813 273 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 C1orf226A1L170 272 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 PEPDP12955 493 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 GNRHRP30968 328 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 FIP1L1Q6UN15 594 aaKnown RBP17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 OR52E2Q8NGJ4 325 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 ZUFSPQ96AP4 578 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 MYH8P13535 1937 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 FARS2O95363 451 aaKnown RBP17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 LAMP1P11279 417 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 GTF2F2P13984 249 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 CEACAM7Q14002 265 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 ATP6AP1Q15904 470 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 TMPRSS12Q86WS5 348 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 RHEBL1Q8TAI7 183 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 DENND1AQ8TEH3 1009 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 ZNF431Q8TF32 576 aaPredicted RBP17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 GPRC5BQ9NZH0 403 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 NPIPB15A6NHN6 443 aaPredicted RBP17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 VSTM5A8MXK1 200 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 TP53I11O14683 189 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 ZNF623O75123 536 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 SEMA4FO95754 770 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 S100A1P23297 94 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 F8A1P23610 371 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 EIF2S3P41091 472 aaKnown RBP17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 HYAL4Q2M3T9 481 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 KBTBD6Q86V97 674 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 SLC44A3Q8N4M1 653 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 C7orf43Q8WVR3 580 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 NINJ1Q92982 152 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 FKBP14Q9NWM8 211 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 MLXQ9UH92 298 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 NUMA1Q14980 2115 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 CCRL2O00421 344 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 RAD1O60671 282 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 DNAJB1P25685 340 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 STOMP27105 288 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 MAMDC4Q6UXC1 1216 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 OR8J3Q8NGG0 315 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 OR4K13Q8NH42 304 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 TMEM234Q8WY98 164 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 FIZ1Q96SL8 496 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 HDHD5Q9BXW7 423 aa17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 EXOSC1Q9Y3B2 195 aaKnown RBP17.84■□□□□ 0.45
SMARCC1-201ENST00000254480 HNRNPA1P09651 372 aaKnown RBP eCLIP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms