RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 SOX1O00570 391 aaPredicted RBP18.91■□□□□ 0.62
HOXC13-201ENST00000243056 INSIG1O15503 277 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 CD1DP15813 335 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 GGT2P36268 569 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 HSF2Q03933 536 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 SNAPC1Q16533 368 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 TMEM215Q68D42 235 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 RAB44Q7Z6P3 723 aaPredicted RBP18.91■□□□□ 0.62
HOXC13-201ENST00000243056 LRRC17Q8N6Y2 441 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 OR4D10Q8NGI6 311 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 UCN3Q969E3 161 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 TSPAN17Q96FV3 270 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 CINPQ9BW66 212 aaPredicted RBP18.91■□□□□ 0.62
HOXC13-201ENST00000243056 MED28Q9H204 178 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 TREX1Q9NSU2 369 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 ZNF226Q9NYT6 803 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 PLEKHB1Q9UF11 243 aaPredicted RBP18.91■□□□□ 0.62
HOXC13-201ENST00000243056 DNAH14Q0VDD8 3507 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 DOCK8Q8NF50 2099 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 PRAMEF33A0A0G2JMD5 474 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 KRBOX1C9JBD0 128 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 ZNF670-ZNF695F2Z2N8 137 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 PRAMEF10O60809 474 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 ZNF682O95780 498 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 C9P02748 559 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 LTBRP36941 435 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 CAPZA2P47755 286 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 CRYZQ08257 329 aaKnown RBP18.91■□□□□ 0.62
HOXC13-201ENST00000243056 HNRNPA0Q13151 305 aaKnown RBP18.91■□□□□ 0.62
HOXC13-201ENST00000243056 GPR33Q49SQ1 333 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 TMEM107Q6UX40 140 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 DBX2Q6ZNG2 339 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 LDB1Q86U70 411 aaPredicted RBP18.91■□□□□ 0.62
HOXC13-201ENST00000243056 Q8N402 240 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 B3GNT7Q8NFL0 401 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 KIAA1143Q96AT1 154 aaPredicted RBP18.91■□□□□ 0.62
HOXC13-201ENST00000243056 ZNF599Q96NL3 588 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 KXD1Q9BQD3 176 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 GABARAPL3Q9BY60 117 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 EMC7Q9NPA0 242 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 NCKAP1Q9Y2A7 1128 aa18.91■□□□□ 0.62
HOXC13-201ENST00000243056 USP34Q70CQ2 3546 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 FAM74A7A6NL05 159 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 HEPACAM2A8MVW5 462 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 ADRA1AP35348 466 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 CRYBB2P43320 205 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 ARHGDIBP52566 201 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 ADAM15Q13444 863 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 FAM74A3Q4VXF1 159 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 SLC19A3Q9BZV2 496 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 POLR1EQ9GZS1 481 aaKnown RBP18.9■□□□□ 0.62
HOXC13-201ENST00000243056 MTG2Q9H4K7 406 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 SESN1Q9Y6P5 492 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 HELZP42694 1942 aaKnown RBP18.9■□□□□ 0.62
HOXC13-201ENST00000243056 TCRBV16S1A1N1A0A5B0 115 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 SMIM30A4D0T7 59 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 A8MXK9 166 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 HPGDSO60760 199 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 CDRT1O95170 752 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 IL1RNP18510 177 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 HK1P19367 917 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 CSTF1Q05048 431 aaKnown RBP18.9■□□□□ 0.62
HOXC13-201ENST00000243056 KIAA0040Q15053 153 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 P2RY14Q15391 338 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 CCDC85BQ15834 202 aaPredicted RBP18.9■□□□□ 0.62
HOXC13-201ENST00000243056 RASSF6Q6ZTQ3 369 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 FAM9CQ8IZT9 166 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 PGBD3Q8N328 593 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 CELF5Q8N6W0 485 aaKnown RBP18.9■□□□□ 0.62
HOXC13-201ENST00000243056 CYB5D2Q8WUJ1 264 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 SLC25A46Q96AG3 418 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 SLC29A3Q9BZD2 475 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 SLC6A13Q9NSD5 602 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 COPZ2Q9P299 210 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 TMEM5Q9Y2B1 443 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 AAR2Q9Y312 384 aaKnown RBP18.9■□□□□ 0.62
HOXC13-201ENST00000243056 KCTD3Q9Y597 815 aa18.9■□□□□ 0.62
HOXC13-201ENST00000243056 ANXA9O76027 345 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 CXCL3P19876 107 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 VLDLRP98155 873 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 RPL6Q02878 288 aaKnown RBP18.89■□□□□ 0.61
HOXC13-201ENST00000243056 EIF4HQ15056 248 aaKnown RBP18.89■□□□□ 0.61
HOXC13-201ENST00000243056 DHCR24Q15392 516 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 KIAA0930Q6ICG6 404 aaPredicted RBP18.89■□□□□ 0.61
HOXC13-201ENST00000243056 RANBP10Q6VN20 620 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 FIBINQ8TAL6 211 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 SMARCD2Q92925 531 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 DPYSL5Q9BPU6 564 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 ACTR10Q9NZ32 417 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 ZNF451Q9Y4E5 1061 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 MTCH2Q9Y6C9 303 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 ISM1B1AKI9 464 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 MMP20O60882 483 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 GABRB1P18505 474 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 SLC6A11P48066 632 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 IDH2P48735 452 aaKnown RBP18.89■□□□□ 0.61
HOXC13-201ENST00000243056 Q6ZSR9 355 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 ZNF605Q86T29 641 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 OR2T4Q8NH00 348 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 WDR36Q8NI36 951 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms