RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 HPDP32754 393 aaPredicted RBP12.75□□□□□ -0.37
DDX39A-201ENST00000242776 SCTRP47872 440 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 RUNX2Q13950 521 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 POU4F3Q15319 338 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 TGFBIQ15582 683 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 OR4D1Q15615 310 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 PPP1R3AQ16821 1122 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 FLYWCH1Q4VC44 716 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 TMPRSS11BQ86T26 416 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 TCAIMQ8N3R3 496 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 ANKRD53Q8N9V6 530 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 RELL2Q8NC24 303 aaPredicted RBP12.75□□□□□ -0.37
DDX39A-201ENST00000242776 ABHD11Q8NFV4 315 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 TCP10LQ8TDR4 215 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 ATL1Q8WXF7 558 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 CCT6BQ92526 530 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 EXT2Q93063 718 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 C18orf12Q96KH6 178 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 ATOH8Q96SQ7 321 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 FAM173AQ9BQD7 235 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 AICDAQ9GZX7 198 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 TUBA8Q9NY65 449 aaPredicted RBP12.75□□□□□ -0.37
DDX39A-201ENST00000242776 NKIRAS1Q9NYS0 192 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 CD274Q9NZQ7 290 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 SPRR3Q9UBC9 169 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 RTTNQ86VV8 2226 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 TRGV5A0A0B4J1U4 118 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 TMEM120BA0PK00 339 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 KDM4EB2RXH2 506 aaPredicted RBP12.74□□□□□ -0.37
DDX39A-201ENST00000242776 AQP7O14520 342 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 PLIN3O60664 434 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 GLSO94925 669 aaPredicted RBP12.74□□□□□ -0.37
DDX39A-201ENST00000242776 ATE1O95260 518 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 IGHG3P01860 377 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 PROCP04070 461 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 MYL2P10916 166 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 GFAPP14136 432 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 PCSK6P29122 969 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 HNMTP50135 292 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 SLC18A1P54219 525 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 SLC10A1Q14973 349 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 CDKL4Q5MAI5 379 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 NDUFAF5Q5TEU4 345 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 NIPAL1Q6NVV3 410 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 OR4K1Q8NGD4 311 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 SLC5A11Q8WWX8 675 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 CCDC126Q96EE4 140 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 FAM111AQ96PZ2 611 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 REPIN1Q9BWE0 567 aaKnown RBP12.74□□□□□ -0.37
DDX39A-201ENST00000242776 ZNF395Q9H8N7 513 aaPredicted RBP12.74□□□□□ -0.37
DDX39A-201ENST00000242776 IL1RL2Q9HB29 575 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 CPSF2Q9P2I0 782 aaKnown RBP12.74□□□□□ -0.37
DDX39A-201ENST00000242776 MYOTQ9UBF9 498 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 IKZF3Q9UKT9 509 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 MMACHCQ9Y4U1 282 aa12.74□□□□□ -0.37
DDX39A-201ENST00000242776 FN1P02751 2386 aaKnown RBP12.73□□□□□ -0.37
DDX39A-201ENST00000242776 URADA6NGE7 173 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 ZNF354AO60765 605 aaPredicted RBP12.73□□□□□ -0.37
DDX39A-201ENST00000242776 WDR1O75083 606 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 CCL3P10147 92 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 ENDOUP21128 410 aaKnown RBP12.73□□□□□ -0.37
DDX39A-201ENST00000242776 PIGAP37287 484 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 TRPC1P48995 793 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 GPR143P51810 404 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 AGFG1P52594 562 aaKnown RBP12.73□□□□□ -0.37
DDX39A-201ENST00000242776 HK2P52789 917 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 HSDL2Q6YN16 418 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 RTL4Q6ZR62 310 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 RGS9BPQ6ZS82 235 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 CAMKMTQ7Z624 323 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 PRIMA1Q86XR5 153 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 SLC22A9Q8IVM8 553 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 ARFGAP2Q8N6H7 521 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 ANKRD42Q8N9B4 389 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 PDPRQ8NCN5 879 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 OR56A3Q8NH54 315 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 LINC01560Q8TB33 94 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 NUDT8Q8WV74 236 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 SARAFQ96BY9 339 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 MBD6Q96DN6 1003 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 FAR2Q96K12 515 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 OR8D2Q9GZM6 311 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 SLC6A15Q9H2J7 730 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 CNOT10Q9H9A5 744 aaKnown RBP12.73□□□□□ -0.37
DDX39A-201ENST00000242776 SACM1LQ9NTJ5 587 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 WWOXQ9NZC7 414 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 EMCNQ9ULC0 261 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 DYRK1BQ9Y463 629 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 CLCA3PQ9Y6N3 262 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 JMJD1CQ15652 2540 aa12.73□□□□□ -0.37
DDX39A-201ENST00000242776 A0A1B0GVC2 190 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 NCF1BA6NI72 391 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-201ENST00000242776 NCF1CA8MVU1 366 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-201ENST00000242776 UBXN8O00124 270 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 LRATO95237 230 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 P04436 131 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 SMIM10L1P0DMW3 83 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 NCF1P14598 390 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-201ENST00000242776 TNNI3P19429 210 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 ATP5F1P24539 256 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms