RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CCDC80Q76M96 950 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 EIF3MQ7L2H7 374 aaKnown RBP14.31□□□□□ -0.12
HDHD3-201ENST00000238379 PRSS42Q7Z5A4 293 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 ZC3H7AQ8IWR0 971 aaKnown RBP14.31□□□□□ -0.12
HDHD3-201ENST00000238379 LRRC25Q8N386 305 aaPredicted RBP14.31□□□□□ -0.12
HDHD3-201ENST00000238379 TTC29Q8NA56 475 aaPredicted RBP14.31□□□□□ -0.12
HDHD3-201ENST00000238379 ELP4Q96EB1 424 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 SLC41A2Q96JW4 573 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 CIB1Q99828 191 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 NUDT22Q9BRQ3 303 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 YY1AP1Q9H869 796 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 A4GALTQ9NPC4 353 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 CPED1A4D0V7 1026 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 EME2A4GXA9 379 aaPredicted RBP14.31□□□□□ -0.12
HDHD3-201ENST00000238379 TMEM229AB2RXF0 380 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 HMGN4O00479 90 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 CLOCKO15516 846 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 FGF17O60258 216 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 PRSS23O95084 383 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 NSA2O95478 260 aaKnown RBP14.31□□□□□ -0.12
HDHD3-201ENST00000238379 CPMP14384 443 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 FOLH1Q04609 750 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 MYBPC3Q14896 1274 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 LPAL2Q16609 132 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 SNAP47Q5SQN1 464 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 PERM1Q5SV97 790 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 NIPAL1Q6NVV3 410 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 D2HGDHQ8N465 521 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 EID2Q8N6I1 236 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 N4BP2L2Q92802 583 aaPredicted RBP14.31□□□□□ -0.12
HDHD3-201ENST00000238379 TANKQ92844 425 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 RAB8BQ92930 207 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 MOAP1Q96BY2 351 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 SLC29A1Q99808 456 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 NTN4Q9HB63 628 aa14.31□□□□□ -0.12
HDHD3-201ENST00000238379 UPK1AO00322 258 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 EMC8O43402 210 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 LDB3O75112 727 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 GPR75O95800 540 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 CER1O95813 267 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 SEMG1P04279 462 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 FHP07954 510 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 TFPTP0C1Z6 253 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 MC3RP41968 323 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 MAGEA2P43356 314 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 MAGEA8P43361 318 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 ARL4DP49703 201 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 EMP3P54852 163 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 PCBP3P57721 371 aaKnown RBP14.3□□□□□ -0.12
HDHD3-201ENST00000238379 SKP1P63208 163 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 CYBRD1Q53TN4 286 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 INTS11Q5TA45 600 aaKnown RBP14.3□□□□□ -0.12
HDHD3-201ENST00000238379 PPP4R4Q6NUP7 873 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 BHLHB9Q6PI77 547 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 SZRD1Q7Z422 152 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 KMT5CQ86Y97 462 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 EPHX4Q8IUS5 362 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 OR56A1Q8NGH5 318 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 SLC38A5Q8WUX1 472 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 MAGED4Q96JG8 741 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 SLC35G5Q96KT7 338 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 BDH2Q9BUT1 245 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 IRAK4Q9NWZ3 460 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 NTMQ9P121 344 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 AK5Q9Y6K8 562 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 VPS13AQ96RL7 3174 aa14.3□□□□□ -0.12
HDHD3-201ENST00000238379 SAC3D1A6NKF1 404 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 A8MU76 341 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 ACOX3O15254 700 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 DEAF1O75398 565 aaPredicted RBP14.29□□□□□ -0.12
HDHD3-201ENST00000238379 HMGN2P05204 90 aaKnown RBP14.29□□□□□ -0.12
HDHD3-201ENST00000238379 MSL3P1P0C860 447 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 PORP16435 677 aaPredicted RBP14.29□□□□□ -0.12
HDHD3-201ENST00000238379 NELFEP18615 380 aaKnown RBP14.29□□□□□ -0.12
HDHD3-201ENST00000238379 SOX18P35713 384 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 PRKAG1P54619 331 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 PRR5P85299 388 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 ID2Q02363 134 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 GRM7Q14831 915 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 MAPK11Q15759 364 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.29□□□□□ -0.12
HDHD3-201ENST00000238379 CRB2Q5IJ48 1285 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 TMTC4Q5T4D3 741 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 REEP3Q6NUK4 255 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 TMEM71Q6P5X7 295 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 ZBTB49Q6ZSB9 765 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 TMPRSS9Q7Z410 1059 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 VTCN1Q7Z7D3 282 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 SLC30A8Q8IWU4 369 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 GALNT4Q8N4A0 578 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 MIPOL1Q8TD10 442 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 KAT2AQ92830 837 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 COL26A1Q96A83 441 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 HSH2DQ96JZ2 352 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 OR51I1Q9H343 314 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 ANKRA2Q9H9E1 313 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 C3orf14Q9HBI5 128 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 ADPRHL2Q9NX46 363 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 OAZ3Q9UMX2 235 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 CLCA2Q9UQC9 943 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms