RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 S100A10P60903 97 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 DNASE1L3Q13609 305 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 LAPTM4AQ15012 233 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 TMEM151BQ8IW70 566 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 MRPL43Q8N983 215 aaKnown RBP18.1■□□□□ 0.49
SMPD3-201ENST00000219334 ZUFSPQ96AP4 578 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 TOE1Q96GM8 510 aaKnown RBP18.1■□□□□ 0.49
SMPD3-201ENST00000219334 PIP5K1AQ99755 562 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 SRA1Q9HD15 236 aaKnown RBP18.1■□□□□ 0.49
SMPD3-201ENST00000219334 C12orf4Q9NQ89 552 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 SARDHQ9UL12 918 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 HOXB9P17482 250 aaPredicted RBP18.1■□□□□ 0.49
SMPD3-201ENST00000219334 PROZP22891 400 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 TUBA3CQ13748 450 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 PPP1R3AQ16821 1122 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 EIF5AL1Q6IS14 154 aaKnown RBP18.1■□□□□ 0.49
SMPD3-201ENST00000219334 ZNF554Q86TJ5 538 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 TMEM135Q86UB9 458 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 PKP2Q99959 881 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 TUBA8Q9NY65 449 aaPredicted RBP18.1■□□□□ 0.49
SMPD3-201ENST00000219334 PEAK1Q9H792 1746 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 P2RY2P41231 377 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 ACTC1P68032 377 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 ACTA1P68133 377 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 UBE2Q1Q7Z7E8 422 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 SCP2D1Q9UJQ7 156 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 FARSAQ9Y285 508 aaKnown RBP18.1■□□□□ 0.49
SMPD3-201ENST00000219334 PRAMEF2O60811 474 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 RFPL1O75677 317 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 FGF3P11487 239 aaPredicted RBP18.09■□□□□ 0.49
SMPD3-201ENST00000219334 ITGB7P26010 798 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 GTF2IRD2BQ6EKJ0 949 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 TMED4Q7Z7H5 227 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 GTF2IRD2Q86UP8 949 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 THAP6Q8TBB0 222 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 NEDD4LQ96PU5 975 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 DUSP23Q9BVJ7 150 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 DPAGT1Q9H3H5 408 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 PARPBPQ9NWS1 579 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 ZNF69Q9UC07 566 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 NR0B1P51843 470 aaKnown RBP18.09■□□□□ 0.49
SMPD3-201ENST00000219334 CDKN2DP55273 166 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 KLHDC10Q6PID8 442 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 C15orf39Q6ZRI6 1047 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 DCP2Q8IU60 420 aaKnown RBP18.09■□□□□ 0.49
SMPD3-201ENST00000219334 RELL1Q8IUW5 271 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 PROKR1Q8TCW9 393 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 ELP5Q8TE02 316 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 MTG2Q9H4K7 406 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 PELI2Q9HAT8 420 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 TAS2R10Q9NYW0 307 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 SEC14L4Q9UDX3 406 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 CLEC4EQ9ULY5 219 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 HOXD8P13378 290 aaPredicted RBP18.09■□□□□ 0.49
SMPD3-201ENST00000219334 CD72P21854 359 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 ARSDP51689 593 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 MAZP56270 477 aaKnown RBP18.09■□□□□ 0.49
SMPD3-201ENST00000219334 ADAMTS5Q9UNA0 930 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 LRRC42Q9Y546 428 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 SHPRHQ149N8 1683 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 SOCS2O14508 198 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 GRIN2CQ14957 1233 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 BOLLQ8N9W6 283 aaKnown RBP18.09■□□□□ 0.49
SMPD3-201ENST00000219334 IL17RCQ8NAC3 791 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 NANOS1Q8WY41 292 aaKnown RBP18.09■□□□□ 0.49
SMPD3-201ENST00000219334 CASD1Q96PB1 797 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 PM20D1Q6GTS8 502 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 LRFN4Q6PJG9 635 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 FUZQ9BT04 418 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 EURLQ9NYK6 297 aa18.09■□□□□ 0.49
SMPD3-201ENST00000219334 GXYLT2A0PJZ3 443 aa18.08■□□□□ 0.49
SMPD3-201ENST00000219334 DPPA5A6NC42 116 aa18.08■□□□□ 0.49
SMPD3-201ENST00000219334 BRINP1O60477 761 aa18.08■□□□□ 0.49
SMPD3-201ENST00000219334 CER1O95813 267 aa18.08■□□□□ 0.49
SMPD3-201ENST00000219334 AK4P27144 223 aaPredicted RBP18.08■□□□□ 0.49
SMPD3-201ENST00000219334 HMBOX1Q6NT76 420 aa18.08■□□□□ 0.49
SMPD3-201ENST00000219334 SLC15A3Q8IY34 581 aa18.08■□□□□ 0.49
SMPD3-201ENST00000219334 OR6C4Q8NGE1 309 aa18.08■□□□□ 0.49
SMPD3-201ENST00000219334 TM9SF4Q92544 642 aa18.08■□□□□ 0.49
SMPD3-201ENST00000219334 DDIT4LQ96D03 193 aa18.08■□□□□ 0.49
SMPD3-201ENST00000219334 CITED4Q96RK1 184 aa18.08■□□□□ 0.49
SMPD3-201ENST00000219334 ZNF559Q9BR84 538 aa18.08■□□□□ 0.49
SMPD3-201ENST00000219334 TOR3AQ9H497 397 aa18.08■□□□□ 0.49
SMPD3-201ENST00000219334 PTTG2Q9NZH5 202 aa18.08■□□□□ 0.49
SMPD3-201ENST00000219334 ACAD8Q9UKU7 415 aa18.08■□□□□ 0.49
SMPD3-201ENST00000219334 DHDHQ9UQ10 334 aa18.08■□□□□ 0.49
SMPD3-201ENST00000219334 NOP16Q9Y3C1 178 aaKnown RBP18.08■□□□□ 0.49
SMPD3-201ENST00000219334 COL2A1P02458 1487 aaPredicted RBP18.08■□□□□ 0.48
SMPD3-201ENST00000219334 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.08■□□□□ 0.48
SMPD3-201ENST00000219334 SLC35E2BP0CK96 405 aa18.08■□□□□ 0.48
SMPD3-201ENST00000219334 ANXA3P12429 323 aa18.08■□□□□ 0.48
SMPD3-201ENST00000219334 EMP2P54851 167 aa18.08■□□□□ 0.48
SMPD3-201ENST00000219334 MAMDC2Q7Z304 686 aaPredicted RBP18.08■□□□□ 0.48
SMPD3-201ENST00000219334 LAS2Q8IYD9 372 aa18.08■□□□□ 0.48
SMPD3-201ENST00000219334 DENND6BQ8NEG7 585 aa18.08■□□□□ 0.48
SMPD3-201ENST00000219334 ATF6P18850 670 aa18.08■□□□□ 0.48
SMPD3-201ENST00000219334 PCDHGA10Q9Y5H3 936 aa18.08■□□□□ 0.48
SMPD3-201ENST00000219334 SLC35F4A4IF30 521 aa18.08■□□□□ 0.48
SMPD3-201ENST00000219334 ZSCAN5BA6NJL1 495 aa18.08■□□□□ 0.48
SMPD3-201ENST00000219334 TBX10O75333 385 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms