RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ZNF181Q2M3W8 571 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 SPANXN2Q5MJ10 180 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 AGBL4Q5VU57 503 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 METRNLQ641Q3 311 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 LCTLQ6UWM7 567 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 UNC5DQ6UXZ4 953 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 TUBA1AQ71U36 451 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 BCDIN3DQ7Z5W3 292 aaKnown RBP12.46□□□□□ -0.41
CTNS-201ENST00000046640 SETD7Q8WTS6 366 aaKnown RBP12.46□□□□□ -0.41
CTNS-201ENST00000046640 SLC38A5Q8WUX1 472 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 HERVK_113Q902F9 699 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 TBC1D20Q96BZ9 403 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 COX14Q96I36 57 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 PITX2Q99697 317 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 SP140LQ9H930 580 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 NEK6Q9HC98 313 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 CPNE5Q9HCH3 593 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 MYO10Q9HD67 2058 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 PDZK1P1A8MUH7 402 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 WWP2O00308 870 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 GADD45GO95257 159 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 BSGP35613 385 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 SOX3P41225 446 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 CCR8P51685 355 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 IFITM2Q01629 132 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 EEF1A2Q05639 463 aaKnown RBP12.46□□□□□ -0.42
CTNS-201ENST00000046640 FCHO2Q0JRZ9 810 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 IRF4Q15306 451 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 MLF2Q15773 248 aaPredicted RBP12.46□□□□□ -0.42
CTNS-201ENST00000046640 CST6Q15828 149 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 ZMAT1Q5H9K5 638 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 C10orf62Q5T681 223 aaPredicted RBP12.46□□□□□ -0.42
CTNS-201ENST00000046640 CPA6Q8N4T0 437 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 UBE2E3Q969T4 207 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 CXorf40BQ96DE9 158 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 NEDD4LQ96PU5 975 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 SIGLEC11Q96RL6 698 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 HOXD1Q9GZZ0 328 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 KLHL31Q9H511 634 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 WDR26Q9H7D7 661 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 ANKRA2Q9H9E1 313 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 ZNF556Q9HAH1 456 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 LHX9Q9NQ69 397 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 GPSM3Q9Y4H4 160 aa12.46□□□□□ -0.42
CTNS-201ENST00000046640 HEATR5BQ9P2D3 2071 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 A0A1W2PPV9 198 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 SLC31A1O15431 190 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 ERAL1O75616 437 aaKnown RBP12.45□□□□□ -0.42
CTNS-201ENST00000046640 C8orf89P0DMQ9 161 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 PCSK2P16519 638 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 DDCP20711 480 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 FCARP24071 287 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 PUM1Q14671 1186 aaKnown RBP eCLIP12.45□□□□□ -0.42
CTNS-201ENST00000046640 MICAQ29983 383 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 KIAA1211LQ6NV74 962 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 DEF8Q6ZN54 512 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 RTL10Q7L3V2 364 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 DGLUCYQ7Z3D6 616 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 YAF2Q8IY57 180 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 TAGAPQ8N103 731 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 AQP11Q8NBQ7 271 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 OR14C36Q8NHC7 312 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 XAGE5Q8WWM1 108 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 POP5Q969H6 163 aaKnown RBP12.45□□□□□ -0.42
CTNS-201ENST00000046640 TMEM19Q96HH6 336 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 MS4A8Q9BY19 250 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 KCNK12Q9HB15 430 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 ACER3Q9NUN7 267 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 THAP10Q9P2Z0 257 aaPredicted RBP12.45□□□□□ -0.42
CTNS-201ENST00000046640 NOX1Q9Y5S8 564 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 A0A1W2PS29 197 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 PDPK1O15530 556 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 NDUFB5O43674 189 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 KRT75O95678 551 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 GASTP01350 101 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 KRT8P05787 483 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 HOXB6P17509 224 aaKnown RBP12.45□□□□□ -0.42
CTNS-201ENST00000046640 GDI1P31150 447 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 LIM2P55344 173 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 TBCEQ15813 527 aaPredicted RBP12.45□□□□□ -0.42
CTNS-201ENST00000046640 NXNL2Q5VZ03 156 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 PTCHD4Q6ZW05 846 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 RD3Q7Z3Z2 195 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 C6orf120Q7Z4R8 191 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 C11orf74Q86VG3 221 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 KBTBD8Q8NFY9 601 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 ZNF486Q96H40 463 aaPredicted RBP12.45□□□□□ -0.42
CTNS-201ENST00000046640 CTRCQ99895 268 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 SPATA9Q9BWV2 254 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 AHSPQ9NZD4 102 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 TRPC4Q9UBN4 977 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 DPP7Q9UHL4 492 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 MAPRE3Q9UPY8 281 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 ANGPT4Q9Y264 503 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 PCDHGA2Q9Y5H1 932 aa12.45□□□□□ -0.42
CTNS-201ENST00000046640 C5orf67F2Z3F1 127 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 HAT1O14929 419 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 LINC01565O15544 149 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 ZW10O43264 779 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 TPD52L2O43399 206 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms