RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Znf367Q0VDT2 340 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Tsr3Q5HZH2 323 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr834Q7TRG8 312 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Chpt1Q8C025 398 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Krt33aQ8K0Y2 404 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Zfp991Q8R1N3 573 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 VillQ91YD6 859 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Smim23Q9DAL0 136 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Tyk2Q9R117 1184 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 NsdhlQ9R1J0 362 aa10.05□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm6133B2RY53 190 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 VldlrP98156 873 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm29609Q3UU56 907 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Pcbp2Q61990 362 aaKnown RBP10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Syt14Q7TN84 555 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gtf3c2Q8BL74 907 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 St3gal4Q91Y74 333 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Zfp869Q9DC47 529 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Yipf5Q9EQQ2 257 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm498D3YYH9 372 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 CryaaP24622 196 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Kcnj5P48545 419 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Tmem198Q8BG75 360 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Dnajc24Q91ZF0 196 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 HckP08103 524 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Hoxb9P20615 250 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 IspdQ5RJG7 447 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Znf354aQ61751 572 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Six3Q62233 333 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Pan3Q640Q5 837 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr384Q7TRX8 312 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Mcph1Q7TT79 822 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr525Q8VGL5 309 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Slc14a1Q8VHL0 384 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Mrgprb4Q91ZC0 321 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm21904A8HG57 180 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm21866J3QMH4 180 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gm2016Q3TQZ4 144 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr135Q8VEY4 312 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr1090Q8VGA6 313 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Rnh1Q91VI7 456 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Srfbp1Q9CZ91 441 aaKnown RBP10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Tmem53Q9D0Z3 276 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Nmrk2Q9D7C9 195 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Slc6a11P31650 627 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Upp1P52624 311 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 PfplQ5RKV8 702 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Elfn2Q68FM6 823 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gatad2aQ8CHY6 629 aaKnown RBP10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Casc3Q8K3W3 698 aaKnown RBP10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr1019Q8VGS3 310 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Fank1Q9DAM9 344 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gpr45Q9EQQ4 373 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Popdc3Q9ES81 291 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 TsnaxQ9QZE7 290 aaKnown RBP10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Spaca5A2AE20 160 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr1188A2AV10 312 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Rab5bP61021 215 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 WasP70315 520 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 AbraclQ4KML4 81 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cys1Q8R4T1 145 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Rab28Q99KL7 221 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Skint7A7XV04 395 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr652B9EHE6 318 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Klrg1O88713 188 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Tead2P48301 445 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Slc35g3Q5F297 340 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 UnklQ5FWH2 727 aaKnown RBP10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Grsf1Q8C5Q4 479 aaKnown RBP10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Wdr37Q8CBE3 496 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Cables2Q8K3M5 476 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Ccm2lQ8VCC6 481 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr1278Q8VF39 313 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Col26a1Q91VF6 440 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Tmem43Q9DBS1 400 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Slc6a14Q9JMA9 638 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr619E9PV95 320 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 ThP24529 498 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 H2-Eb2Q3UUV9 287 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Lmo3Q8BZL8 145 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Piwil4Q8CGT6 848 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Elp5Q99L85 300 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 PgcQ9D7R7 392 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Tceal6Q9DB24 200 aa10.04□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Xkr6E9Q6C8 638 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Slc30a4O35149 430 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gnb5P62881 395 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Taf6Q62311 678 aaKnown RBP10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Kiaa0895lQ810A5 467 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Med9Q8VCS6 142 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Gpr37l1Q99JG2 481 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Dcdc2cQ9D1B8 347 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 VegfaQ00731 214 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Nell1Q2VWQ2 810 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 TmieQ8K467 153 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Adhfe1Q8R0N6 465 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Rdh10Q8VCH7 341 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr622Q8VGY7 317 aa10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Aco2Q99KI0 780 aaKnown RBP10.03□□□□□ -0.8
Scn8a-201ENSMUST00000082209 Olfr705Q9EPF7 316 aa10.03□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms