RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Cnih2O35089 160 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gtf2h4O70422 463 aaKnown RBP9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Capza1P47753 286 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Vamp2P63044 116 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Lingo4Q149C3 593 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Pdlim7Q3TJD7 457 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Zc3h12aQ5D1E7 596 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Ppp1r26Q6A025 1163 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gpr176Q80WT4 515 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cpped1Q8BFS6 312 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Mrpl54Q9CPW3 135 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slc39a5Q9D856 535 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Stra6lQ9DBN1 621 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slc29a1Q9JIM1 460 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Yipf7Q9JIM5 254 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 NumbQ9QZS3 653 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Celf2Q9Z0H4 508 aaKnown RBP9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Vmn1r77E9PY60 306 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr549E9Q542 316 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Znf683I7HJS4 458 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tcf3P15806 651 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tia1P52912 386 aaKnown RBP9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 SgcdP82347 289 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 SgcgP82348 291 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cmpk2Q3U5Q7 447 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Vtcn1Q7TSP5 283 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 LdahQ8BVA5 326 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 MepceQ8K3A9 666 aaKnown RBP9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gatad2bQ8VHR5 594 aaKnown RBP9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Imp3Q921Y2 184 aaKnown RBP9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Nop16Q9CPT5 178 aaKnown RBP9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cdrt4Q9DA64 179 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Yipf5Q9EQQ2 257 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Scamp5Q9JKD3 235 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Serpina3jD3Z451 420 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cacng2O88602 323 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gjb1P28230 283 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Sh3bp2Q06649 559 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Krtcap2Q5RL79 136 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tigd3Q7TM95 470 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Zfp790Q80ZX2 779 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Sdhaf3Q8BQU3 125 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Bcas3Q8CCN5 928 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tor3aQ9ER38 385 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm3633L7N233 213 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm9611L7N476 213 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 F3P20352 294 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 IduaP48441 634 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Hbq1bQ3U0A6 142 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cpxcr1Q3V0P1 322 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Osbp2Q5QNQ6 908 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Sf1Q64213 653 aaKnown RBP9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Rpl35Q6ZWV7 123 aaKnown RBP9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 MafaQ8CF90 359 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 RhdQ8CF94 418 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Rbm18Q9CR83 190 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Camta1A2A891 1682 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm1330D3Z460 184 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr190K7N5T5 307 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1221L7MU53 311 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 ChrndP02716 520 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 GlaP51569 419 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Ccr5P51682 354 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Hoxd13P70217 339 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 ArvcfP98203 962 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 McidasQ3UZ45 379 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Fgl1Q71KU9 314 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Zcchc4Q8BKW4 512 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Aph1bQ8C7N7 257 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Fbxl8Q8CIG9 374 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Glis1Q8K1M4 789 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Sirt3Q8R104 334 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 LsrQ99KG5 594 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm26657Q9CVR1 127 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Shmt2Q9CZN7 504 aaKnown RBP9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Mgat4cQ9D306 478 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Zfp869Q9DC47 529 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Myh4Q5SX39 1939 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Trbv20A0A0B4J1H5 111 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Xpnpep2B1AVD1 674 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 4930402K13RikB1AW18 415 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Btbd16E9Q173 522 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Nr1h5E9Q5A6 505 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Pdlim3O70209 316 aaKnown RBP9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Ltb4rO88855 351 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slc2a7P0C6A1 513 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Htr2aP35363 471 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 ActbP60710 375 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Actg1P63260 375 aaKnown RBP9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Ntsr2P70310 416 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm813Q3UWK9 176 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Naa50Q6PGB6 169 aaKnown RBP9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Mppe1Q80XL7 396 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Psmf1Q8BHL8 271 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Csnka2ipQ8CH19 720 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1176Q8VG40 315 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Rnf167Q91XF4 347 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slc8b1Q925Q3 585 aa9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Stoml2Q99JB2 353 aaKnown RBP9.75□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Dusp12Q9D0T2 339 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 64.7 ms