RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Chrm4P32211 479 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Cct3P80318 545 aaKnown RBP10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Hoxd1Q01822 328 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 CblbQ3TTA7 982 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Rars2Q3U186 578 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Timm8a2Q4FZG7 97 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Opa3Q505D7 179 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Ssr4Q62186 172 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Pwwp2aQ69Z61 730 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Gpalpp1Q69ZC8 346 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Vps9d1Q8C190 649 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Nt5dc1Q8C5P5 467 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 St7lQ8K4P7 559 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Vmn1r215Q8R264 300 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Vmn1r38Q8R2E1 302 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Acsl6Q91WC3 697 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Rpp25Q91WE3 199 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Macrod1Q922B1 323 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Mri1Q9CQT1 369 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Cyp2u1Q9CX98 530 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Ppm1dQ9QZ67 598 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Skp2Q9Z0Z3 424 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Kntc1Q8C3Y4 2207 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 NrapQ80XB4 1728 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Igkv5-43A0A0B4J1J2 115 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Cd300ld2A2A7W0 305 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Tmem240B2RWJ3 173 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Ephb6O08644 1014 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 MaffO54791 156 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Rit1P70426 219 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Prelid2Q0VBB0 177 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Pydc3Q3V3Q4 588 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Plk5Q4FZD7 595 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Bhlha9Q5RJB0 231 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Cdh12Q5RJH3 794 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Fzd4Q61088 537 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Cntn4Q69Z26 1026 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Gpbp1l1Q6NZP2 473 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Mettl20Q80ZM3 255 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Klf8Q8BLM0 355 aaKnown RBP10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Zfp101Q8BP18 612 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Gpr26Q8BZA7 337 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Teddm1bQ8CC62 306 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Uhrf1Q8VDF2 782 aaKnown RBP10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 TMEM121BQ99MX7 572 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 5330417H12RikQ9D3P2 110 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Prmt1Q9JIF0 371 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Acot2Q9QYR9 453 aa10.41□□□□□ -0.74
Msh3-201ENSMUST00000022220 Cyp2j5O54749 501 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 CcnkO88874 554 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Tbpl1P62340 186 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Rps26P62855 115 aaKnown RBP10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Bcl2a1cQ0P538 128 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Zfp791Q497V9 528 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 OmpQ64288 163 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Fbxl19Q6PB97 674 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 ShbQ6PD21 503 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Olfr1036Q7TR85 310 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Lrrtm2Q8BGA3 515 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Pp2d1Q8BVT6 620 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Lrrtm3Q8BZ81 582 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 PpcdcQ8BZB2 204 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Chpt1Q8C025 398 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Vmn1r185Q8R299 319 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Slc9a8Q8R4D1 576 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Tspan1Q99J59 240 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Tspan11Q9D1D1 253 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Alyref2Q9JJW6 218 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Znf143O70230 638 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Gtf2h4O70422 463 aaKnown RBP10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 TyrP11344 533 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Srp54P14576 504 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Yap1P46938 488 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 ArntP53762 791 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Dnaja1P63037 397 aaKnown RBP10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Six5P70178 719 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Alg10bQ3UGP8 474 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 2900092C05RikQ5I0V9 184 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Kif18bQ6PFD6 834 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 C8bQ8BH35 589 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 PgghgQ8BP56 690 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 LdahQ8BVA5 326 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Abhd18Q8C1A9 464 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Nedd4lQ8CFI0 1004 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Olfr448Q8VES9 310 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Cdhr1Q8VHP6 859 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Msantd3Q9CR78 275 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Ndufs4Q9CXZ1 175 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 PyurfQ9D1C3 112 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Dnase1l1Q9D7J6 314 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Ptges3lQ9D9A7 131 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Natd1Q9DBW3 110 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 4930433I11RikA0A0U1RPT6 723 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 CK137956B1AYM9 596 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Zfp758E9QAA1 583 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Pdlim1O70400 327 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Btbd1P58544 488 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Ica1P97411 478 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Fam109bQ14B98 259 aa10.4□□□□□ -0.74
Msh3-201ENSMUST00000022220 Kcnk6Q3TBV4 313 aa10.4□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms